Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01456 ATGGCGTTTGATCAAAACTCTAGCCCCAAAGATATGCGGCCACCACCGCTAAATGTAGCCCGATCGGAGGAGACACTCGTTTTGCCTGTAAGTACTGCGGCAGGTAGGGACAATGGTGCCGCCGGTGCGGTTCCTCTTTTCTATCCTGATGGTGGATTGGTTGGAGTGGGATATGGAAATGTGGCTTCTGGTACTGCTGCTTCTACCACATGGTGCGTTCGCCCTAATGTTGGGTTTAATTTTCCCAATCGGGTTGCTGGTGCTAATGCTGTTGATCCTTCGCGTAGTTTTGTTGCAACTGCTAATGGATATCCTTTGAATTTGGGCAACTGGGTTGCCGGTAATGCTTTTGATAATAATGCCTTTCAGTGTAGTAGCAGAGTAATTGGCAAtggtggtgatcgtgctggtggtgttggtTTGATTGGGACTGGTTGCAATCCCCCTGCTAGTCAGCGGGTTGATAAATCGAGTGAAAACGGCGGGGATGATTCGGTTTCAGGGCGGAAATTGAAGTTCATGTGTAGTTATGGTGGGAAGATTTTGCCTAGACCTAGTGATGGAATGTTGAGGTATGTTGGTGGGCAGACTAGGATAATAAGTGTTAAGAGAGATGTGAGTTTTAGTGATTTGGTGCAAAAGATGGTTGATACTTTTGGGCAACCTGTAGTTATCAAATATCAGCTACCTGGTGAGGATCTTGATGCATTGGTCTCGGTTTCCTGCCCCGATGATCTGGATAATATGATGGAGGAATATGAAAGGTTGATTGAGAGGTCTTCAGATGGTTCTCCTAAACTAAGAGTCTTTTTGTTTTCTGCTTCGGAATTTGATCCTTCTAGTGTGCTACAGTTTGTAAATTTACATGATGGTGGGCAGAAATATGTTGAAGCTGTGAATGGAATTTCTGATAGGGTTATTGGCAAACTCAACAGGAAAGAGAGTATTACAAGTGCAGCTTCTACTCAAAATTCTGATTTGAGTGGGTTAGAGGTTCCTGATAGCACAAATGCTGCTCAAGTAGAAGTTAATGGGCCACCTATATCCATCACTTTACCACCCGAGGCAAATGTTGCCGCATCTCATGTTGCTACTACTGCAAATGTTATGGTTTCTGAGCCTGTTACATCGGTATGCTCAGATGTTTCTGCAGTTTCATTAGGCATACCTGTGGCTAATTCAGGTCCAATTCGTACTCCACCTTTCCAGAAAGAGGTTGAGGTAGAGAAGTCTGTGCCAACTACATTATCCCAACAACAATTTGGGTTTCAGCAGTCTGGAATGGAAATTCCACCATCTGTGCCTCTGCAGGCTTTTCTTGATACTCGACAAGAAGTTCTGAACCATGCAGATTATGTCCAGCTGCCACCCCATATGAGATTCCAAAGTCCTCAGTTTATAGGTAGGCCAGGGACTGTCTACTCCCAGAATCATTTTCATGATGATACTACTCGTTTTGCATCCCAACAGGTAATCCCTGCAGTGCAGATGACAATGAATCAGCCATCTTCTCATACCGGTATAAGACCAAGTGTTATTCAACCACCACCAGTCATGCAAGCACAACAAAACTGTTTGGAGCAATATTATGGTGAAAATACTTCAGGGCTAAGGATGCACCAGCTTCTATCTGATCAAAGTTACAAGGCATATCCACTTCAAGTTCCTTTCCGAGGTAATTATGGCTGGGTTCAGGTTTCTCCATCAGAGCATGTTATTTTTCATGATGCATTATTACCTCAACAACCAGTAATGGTCCCTCATAGAGTGGAGGACTGTTATATGTGTCAGAAAAAACTGCCTCATGCACATTCAGATCCAGTGGTTCCGGATCAGCATAATAGCTTTGCACATTCAATTCCCGATTCAATGCCAAGTTACAATAGTCTCCCGGTGGAGGACAGTTTAAGAGCTCAAGCAACAACCAGGGTTTTGGTGACTGCACCGTTGAATGAAGGCAATGTCAATGTTGAACAAACAGTTGGGACCAGACCCAGGGTCATTATACCGTGCAGTGACACAAGCGGACTTTCTCTGGAGGCTGAAGGTGGGAGAAACTGTAGAATGGACAGGTCTGATCATCCCAGAAATGTAGCAGTTATCCCAGAAACAGTTGGAAGAACAGGTGAAAAACAGTCGCCAAGAGATGGGCTGACAGGAACAGCACCACTGTCTTATCTAGAGGATTTCGCTCGCCAGCATGTGGTACCAGTTGATAACAGGATCAAAGAGGAGGTGGTTGTGAATAAGCCTGTTAATGAAAAACCTTTAGTTGGTGGCACATCTGTTGAAACCTCTGAGTGTATGGTTCAAGAATCATCAACAGAGTATACTAATATACATTCTAGTACAATTTCAAAAGCAGATGCTGTGGAGAATTGGATTGCACAGGACCTGCTCAAACCTATTGATGGAAGGATGGACAACCTCAAGATAAGCAATCCTGAAATTTTTGTAAATAATGATAATTTTGATTACAATATTCAGCATGCTATAGAGAAGAAAGCGGTGGTTTCGGATAACAATCTTGGCAGGTCAAAATTGATTGCTGATGGAAATCAAATTAAGATGATGGATATTCTTCCTAATTCCACTGTAGAAATTTCATATGGTAATAATTCTAGGCAAATGGAGTACAATGAGGTTGCACACCCGCCTGTTTGGGGTCCTCCTGGAACAAATCTTCAATCAAACAATGGAATCCATCAGAAGGATGATGTTTTATCTTCAATTTCACAATCTGTTGGGTTTGGACATGTGCAGGATTCTTCAAACTCGCTTTTTAGCAATCAGGATCCCTGGAATATACACAGCACCTACTTTCCTCCACCTAGACCTAACAATGTCACATCAAAGAAAGAAACCTATTCTTATAAGGATCTGTTTGGTGACAATTCAGGCAACAATGGGGAACAAAATCTAGACGCTCAATTAAATGATGGTCTCTGTCAGACATTCAAACAGAATTTAACATTAGAAGAAGCTCGATCTGCCAAGGTATCACCAGAAGATCAACAACTTCAAGCTGTTGCTGAAAGTTTAGCCGCATCAGTTCTGCATTCAAGCACTTCAAATCCTGACTTACATGCTAGGGATGTGTCCTATCACGAAGACATTGAAGACGTAGATGTTCAAAACAATCTACTAGATATACACTATAAAGAAAAAACTCAGGATGTCAAGAGCATGATCTCGGAGAAGGGACATTTTGGCTTTCCAGCATCAGATGTTGGAGCATTACAGATTATAAAGAATTGTGACCTTGAAGAGCTAGTAGAATTGGGTTCTGGCACCTTTGGGACTGTGTATCATGGAAAGTGGAGAGGTACTGATGTTGCAATAAAGCGGATTAACGATAGATGTTTTGCTGGAAAGCCTTCAGAGGAAGAGCGCTTGAGAGCTGATTTTTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCACCCAAATGTGGTAGCTTTCTATGGCGTTGTTCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTGACAGAATATATGGTTAACGGTTCTCTAAGAAATGCCTTCCAGAAGAATGGAAGGAATCTTGACAAGCGCAAGCGTCTTATGATTGCAATGGATGTTGCCTTCGGTATGGAGTACCTCCATGGAAAAAACATAGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGTGATTCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTGTCGAAAGTAAAATGCCAGACTCTAATATCTGGTGGTGTGAGAGGAACCCTACCTTGGATGGCACCTGAACTGCTGAATGGGAGTAGTAGCCTTGTTTCAGAGAAGGTTGACGTGTTCTCATTTGGTATTGTCATGTGGGAACTCCTCACTGGAGAAGAGCCGTATGCTGATTTGCACTATGGGGCAATCATAGGTGGCATTGTGAACAACACTTTGCGGCCTCTAGTTCCAGAATCTTGTGATCCAGAATGGAGAGTGGTGATGGAGAGGTGCTGGTCATCAGAGCCATCAGAAAGACCTTCATTTACCGAGGTTGCCAATGATTTACGATCCATGGCAGCCAAGATCTCTCCCAAAGGACAAAATCAACAGCAGCAACCCACTTCATCTCAGAATCAAGTGCAGAAATAA 4137 0.4288 MAFDQNSSPKDMRPPPLNVARSEETLVLPVSTAAGRDNGAAGAVPLFYPDGGLVGVGYGNVASGTAASTTWCVRPNVGFNFPNRVAGANAVDPSRSFVATANGYPLNLGNWVAGNAFDNNAFQCSSRVIGNGGDRAGGVGLIGTGCNPPASQRVDKSSENGGDDSVSGRKLKFMCSYGGKILPRPSDGMLRYVGGQTRIISVKRDVSFSDLVQKMVDTFGQPVVIKYQLPGEDLDALVSVSCPDDLDNMMEEYERLIERSSDGSPKLRVFLFSASEFDPSSVLQFVNLHDGGQKYVEAVNGISDRVIGKLNRKESITSAASTQNSDLSGLEVPDSTNAAQVEVNGPPISITLPPEANVAASHVATTANVMVSEPVTSVCSDVSAVSLGIPVANSGPIRTPPFQKEVEVEKSVPTTLSQQQFGFQQSGMEIPPSVPLQAFLDTRQEVLNHADYVQLPPHMRFQSPQFIGRPGTVYSQNHFHDDTTRFASQQVIPAVQMTMNQPSSHTGIRPSVIQPPPVMQAQQNCLEQYYGENTSGLRMHQLLSDQSYKAYPLQVPFRGNYGWVQVSPSEHVIFHDALLPQQPVMVPHRVEDCYMCQKKLPHAHSDPVVPDQHNSFAHSIPDSMPSYNSLPVEDSLRAQATTRVLVTAPLNEGNVNVEQTVGTRPRVIIPCSDTSGLSLEAEGGRNCRMDRSDHPRNVAVIPETVGRTGEKQSPRDGLTGTAPLSYLEDFARQHVVPVDNRIKEEVVVNKPVNEKPLVGGTSVETSECMVQESSTEYTNIHSSTISKADAVENWIAQDLLKPIDGRMDNLKISNPEIFVNNDNFDYNIQHAIEKKAVVSDNNLGRSKLIADGNQIKMMDILPNSTVEISYGNNSRQMEYNEVAHPPVWGPPGTNLQSNNGIHQKDDVLSSISQSVGFGHVQDSSNSLFSNQDPWNIHSTYFPPPRPNNVTSKKETYSYKDLFGDNSGNNGEQNLDAQLNDGLCQTFKQNLTLEEARSAKVSPEDQQLQAVAESLAASVLHSSTSNPDLHARDVSYHEDIEDVDVQNNLLDIHYKEKTQDVKSMISEKGHFGFPASDVGALQIIKNCDLEELVELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEEERLRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNAFQKNGRNLDKRKRLMIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDSHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPLVPESCDPEWRVVMERCWSSEPSERPSFTEVANDLRSMAAKISPKGQNQQQQPTSSQNQVQK 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01456 1378 ProSitePatterns Protein kinases ATP-binding region signature. 1094 1125 IPR017441 GO:0005524
Car01g01456 1378 SUPERFAMILY CAD & PB1 domains 186 279 - -
Car01g01456 1378 CDD PB1_UP2 174 272 - -
Car01g01456 1378 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 898 1360 - -
Car01g01456 1378 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 139 905 - -
Car01g01456 1378 SUPERFAMILY Protein kinase-like (PK-like) 1082 1351 IPR011009 -
Car01g01456 1378 MobiDBLite consensus disorder prediction 1358 1378 - -
Car01g01456 1378 ProSiteProfiles Protein kinase domain profile. 1088 1355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01456 1378 PRINTS Tyrosine kinase catalytic domain signature 1170 1183 IPR001245 GO:0004672|GO:0006468
Car01g01456 1378 PRINTS Tyrosine kinase catalytic domain signature 1207 1225 IPR001245 GO:0004672|GO:0006468
Car01g01456 1378 PRINTS Tyrosine kinase catalytic domain signature 1278 1300 IPR001245 GO:0004672|GO:0006468
Car01g01456 1378 PRINTS Tyrosine kinase catalytic domain signature 1322 1344 IPR001245 GO:0004672|GO:0006468
Car01g01456 1378 SMART serkin_6 1088 1357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01456 1378 SMART PB1_new 185 274 IPR000270 GO:0005515
Car01g01456 1378 CDD STKc_MAP3K-like 1094 1351 - -
Car01g01456 1378 MobiDBLite consensus disorder prediction 1355 1378 - -
Car01g01456 1378 Pfam Protein tyrosine and serine/threonine kinase 1092 1351 IPR001245 GO:0004672|GO:0006468
Car01g01456 1378 MobiDBLite consensus disorder prediction 1 21 - -
Car01g01456 1378 Gene3D Phosphorylase Kinase; domain 1 1082 1175 - -
Car01g01456 1378 Gene3D Transferase(Phosphotransferase) domain 1 1176 1378 - -
Car01g01456 1378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1213 1225 IPR008271 GO:0004672|GO:0006468
Car01g01456 1378 MobiDBLite consensus disorder prediction 147 166 - -
Car01g01456 1378 Pfam PB1 domain 190 272 IPR000270 GO:0005515
Car01g01456 1378 Gene3D - 191 274 - -
Car01g01456 1378 PANTHER SERINE-THREONINE PROTEIN KINASE 898 1360 - -
Car01g01456 1378 PANTHER SERINE-THREONINE PROTEIN KINASE 139 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01456 Car-Chr1 24641443 24652505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01456 169 1371 MAP Kinase Kinase Kinase AT3G46920 42.046 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Car01g01456 PK_Tyr_Ser-Thr 5.9e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01456 - - mtr:MTR_2g461180 2145.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01456 01 24641443 24652505 Car01g01456 01 24641443 24652505 ECH
Car07g00239 07 2124558 2130558 Car01g01456 01 24641443 24652505 PCT
Car07g00672 07 5887197 5896362 Car01g01456 01 24641443 24652505 PCT