Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01453 ATGGACTATACTCTTCTTGAAAATCTTAATGATCAAAGCGATAATTGGAATGACTACTCAATCAACTCAACTTCAACAACAAGGGTTTATATTAACCTAGACATACCTGAATTCAATATGTTTTCACAAAGTGATTCCGCTCAAAGTCAAGAAGATGAAGTTAGAGAAATACCACCTCAAGATTTTTTCCACAATACTCCGGAGAAAAGAATGGTGAGGAATCGAACAACATTAAAACATATAATGGCCATGAAATGGGAATCCAATGTTCAGGAAAGGCTATTCACAATCTGTGCAACTATCAATGACATTGATTACAAATTTGGATGGAATTACATTGGATGTGAAAATTGTCTCACAAAATTAACTCAACAACGCCAACAATACTATTGTCCCTTGTGTGACATGACATCAAAGTACCCTGCACCAAGGTTCAAGATTCAATTGAGAGTGTCAGATGAAACATCAACAACAACATTTACTATGTTTGATAAAGAAGCTCAAAAACTCCTCAACACTACAGCAACTCAACTTTTGGAGAAATTGGACAACATAGAAAGACCATCTACTCTACAAAATTTGTGTAACCGCAAGCTCATTTTTGAAATACGATTGTCTGATAAGAACTTAAAAGAAGGATCGCAAACATATACGATTACAAGAACTTTTGTCCCCGCCAACATTTTCCTCGATACAACAAATAGTATCCACATCAAACAGGAACCAAAGTCACCTCAACCATCAACAACGTCCAACTCAAAGGACAAAGAGGATATCAAACAAAAAGGTAAAATACATGAAGAAGTGGACTATAGAGATGAGGATAATGATAAAGACAACAATGACAACCAGTTATCCAAAGGAAAAATCAAGGTAGAACAAAACAATCAAAATATTCAAATATCATCTACAGATGAAGATACAATCAAGACAAAAATTACAAAAAAAAAGAAGATTATGGTCGAGAATATTACATCATCCGACGAAGAGCCTATCCTTCTACGTACCTTAAGGGGAACAAAAAAGAAGAAACCAAAAGAAAAACAATCTGGAAGTGTAAGGAAATTGATAAAACAAAAAACAAAACCAAAATAA 1095 0.3406 MDYTLLENLNDQSDNWNDYSINSTSTTRVYINLDIPEFNMFSQSDSAQSQEDEVREIPPQDFFHNTPEKRMVRNRTTLKHIMAMKWESNVQERLFTICATINDIDYKFGWNYIGCENCLTKLTQQRQQYYCPLCDMTSKYPAPRFKIQLRVSDETSTTTFTMFDKEAQKLLNTTATQLLEKLDNIERPSTLQNLCNRKLIFEIRLSDKNLKEGSQTYTITRTFVPANIFLDTTNSIHIKQEPKSPQPSTTSNSKDKEDIKQKGKIHEEVDYRDEDNDKDNNDNQLSKGKIKVEQNNQNIQISSTDEDTIKTKITKKKKIMVENITSSDEEPILLRTLRGTKKKKPKEKQSGSVRKLIKQKTKPK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01453 364 Pfam Replication factor-A C terminal domain 95 217 IPR013955 -
Car01g01453 364 CDD RPA1_DBD_C 95 221 IPR013955 -
Car01g01453 364 MobiDBLite consensus disorder prediction 235 252 - -
Car01g01453 364 Gene3D - 63 228 IPR012340 -
Car01g01453 364 MobiDBLite consensus disorder prediction 253 286 - -
Car01g01453 364 PANTHER REPLICATION FACTOR A 1, RFA1 78 320 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Car01g01453 364 MobiDBLite consensus disorder prediction 287 303 - -
Car01g01453 364 SUPERFAMILY Nucleic acid-binding proteins 73 223 IPR012340 -
Car01g01453 364 PANTHER OS11G0697050 PROTEIN 78 320 - -
Car01g01453 364 MobiDBLite consensus disorder prediction 235 303 - -
Car01g01453 364 MobiDBLite consensus disorder prediction 325 364 - -
Car01g01453 364 MobiDBLite consensus disorder prediction 338 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01453 Car-Chr1 24376728 24379262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01453 20 178 Core DNA Replication Machinery Family AT5G08020 25.466 5.45e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01453 - - cam:101502235 491.115