Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01452 ATGGTTGCAGCCTACTTCATTCTTGAGGTTTTCGCTAGGGATGGGGTGTCGTTTTCAACTACTTGTGAAAATCTTCTCCCTGGACCTTGGATAATTGATGACCTTGATACTTTAAAATTAAAATGGAGCAACAACTCCGGGAAGAAGGTTATCATATTTGTTGATAACTATGGTGGAGATATTATTTTAGGTGATCAACTTGCAATAGCAAAGGAAACAGGAAGGCGTCTAGGGATGGGGACTAACATGTATCCTTCTTCATCATTGCTTGGTGACAATAAAGATCAATTAGGTGCTATCTCTATTGATGATCTCATTGAGAATTCTCAACTAAACAAGGACAATTCATCCATAATCATTGGATTATAA 369 0.374 MVAAYFILEVFARDGVSFSTTCENLLPGPWIIDDLDTLKLKWSNNSGKKVIIFVDNYGGDIILGDQLAIAKETGRRLGMGTNMYPSSSLLGDNKDQLGAISIDDLIENSQLNKDNSSIIIGL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01452 122 Gene3D - 61 109 IPR023214 -
Car01g01452 122 PANTHER PLASMA MEMBRANE ATPASE 60 109 - -
Car01g01452 122 SUPERFAMILY AF1104-like 3 64 IPR036075 -
Car01g01452 122 PANTHER CALCIUM-TRANSPORTING ATPASE 60 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01452 Car-Chr1 24372024 24372937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01452 5 107 Primary Pumps ATPases AT1G17260 44.643 1.09e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01452 K24854 - cam:105851449 244.973