Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01432 ATGGCTCACTCAAAAGCTTCAAATTCATATTTTTTCTACTCTCTCATTTTCTCTTTAGTTTTGTATGACATTTTCATTATAAAGATTACAAATGCAATTGTTATTGCTAATGTTACTGTTGTTGTTGATGGGAGTGGAAACTATACTTCGGTGAAGGAAGCGGTACTTGCAGCACCTATCAATAGCATGAAACGCTATGTGATATTTGTAAAGAAGGGTGTCTACATAGAGAATGTATTTATTCATGAAACCAAGGTGAACATCACAATAATTGGAGAAGGTATGGATGCTACTATCATCTTTGGTAACTTGAGTCACCGTCAAAATAACTTAACTTCATACGAAACTGCTACCTTTGGTAAGGACTCTGTTCCCACAATCACTGCATATTCTATTTCCCCTGTATATTGCCCACTTTAA 420 0.3524 MAHSKASNSYFFYSLIFSLVLYDIFIIKITNAIVIANVTVVVDGSGNYTSVKEAVLAAPINSMKRYVIFVKKGVYIENVFIHETKVNITIIGEGMDATIIFGNLSHRQNNLTSYETATFGKDSVPTITAYSISPVYCPL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01432 139 Gene3D - 32 133 IPR012334 -
Car01g01432 139 PANTHER PECTINESTERASE 25 119 - -
Car01g01432 139 PANTHER PECTINESTERASE 25 119 - -
Car01g01432 139 SUPERFAMILY Pectin lyase-like 36 131 IPR011050 -
Car01g01432 139 Pfam Pectinesterase 37 121 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01432 Car-Chr1 23335325 23335744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01432 30 119 Carbohydrate Esterase AT3G43270 51.111 7.26e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01432 K01051 - gmx:100810815 102.449