Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01430 ATGCGTTCATCTCAGAGTAGCGGCAGTCTTAGCAGCGTCGCCAGTAGCGGCGGAAGGACAAGAGTTGGGAAGTTCGAGCTTGGTCGGACGCTAGGCGAGGGAAATTTCGCGAAGGTGAAGTTTGCTAGGAACGTTGAAAGTGGAGAACACGTAGCTATCAAGATTCTCGATAAGGATAAAATTCTCAAGCACAAAATGATTCGTCAGATAAAACAAGAAATATCAACAATGAAACTCATTAGACATCCAAATGTCATACGCATGCATGAGGTAACAGCTAGCAAAACAAAGATATTCATTGTTATGGAACTTGTGACCGGTGGGGAGCTTTTTGATAAAATTGTACGCAGTGGGAGGTTGAAAGAAGATGAAGGAAGAAAATATTTTCAAGAGCTTATATGTGCTGTGGATTACTGTCATAGTAGAGGTGTTTGCCACAGAGACCTAAAGCCTGAGAATTTATTGCTGGATTCTAATGGAAGGCTTAAAGTATCAGATTTTGGATTGAGTGCGTTGCCTCAACAAGTTCGGGAAGATGGGCTACTTCACACAACATGTGGTACGCCAAATTATGTCGCTCCAGAGGTAATCCACAATAAAGGATATGATGGTGCAAAGGCGGATCTCTGGTCATGTGGTGTTATTCTTTTTGTTTTAATGGCCGGCTATTTGCCCTTTGAAGAAACCAATCTTATGGCTTTATATAAAAAGATTTTCAAGGCTGAGTTCACCTGTCCTCCATGGTTCTCTTCAAGTGCAAAGAAACTAATCAAAAGGATCCTTGATCCCAATCCTAATACACGGATTACAATTGCCGAGGTCATTGAAAATGAGTGGTTCAAGAAGGGATATACACCTCCTGTGTTTGAACAGGCTGATGTTAGTCTTGATGATGTAAATTCTATTTTCAGCGATTCTATGGATTCAGTAGATATTATCGTTGAAAGGCATGTAGAGAGGCCTGTGGCACCTGTGACTATGAATGCATTTGAACTTATCTCTAAGTCTCAAGGCCTCAACCTTGGTAATCTTTTCGAGAAACCAATGGGACTTGTTAAAAGGGAAACGAGATTCACATCCAAATGTTCAGCGAATGAGATAATTTCAAAAATCGAGGAAACTGTAGGACCTCTGGGTTTTGATGTCAAGAAAAACAACTGCAAGTTAAAGATTCAAGGGGAAAAGACTGGACGAAAAGGTCATCTATCTGTAGCCACTGAGATCTTGGAGGTGGCCCCTTCAATTTACATGGTTGAGATGCGAAAGTCGGGAGGAGATACTCTGGAATTTCACAAGTTCTACAAGAATATATCTACTGGGCTGAAAGATATCGTTTGGAAAGCAGAGCCGATAGATGAAGAAAAATACGACGGTGCCAGTACATCAAAATAA 1392 0.4109 MRSSQSSGSLSSVASSGGRTRVGKFELGRTLGEGNFAKVKFARNVESGEHVAIKILDKDKILKHKMIRQIKQEISTMKLIRHPNVIRMHEVTASKTKIFIVMELVTGGELFDKIVRSGRLKEDEGRKYFQELICAVDYCHSRGVCHRDLKPENLLLDSNGRLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILFVLMAGYLPFEETNLMALYKKIFKAEFTCPPWFSSSAKKLIKRILDPNPNTRITIAEVIENEWFKKGYTPPVFEQADVSLDDVNSIFSDSMDSVDIIVERHVERPVAPVTMNAFELISKSQGLNLGNLFEKPMGLVKRETRFTSKCSANEIISKIEETVGPLGFDVKKNNCKLKIQGEKTGRKGHLSVATEILEVAPSIYMVEMRKSGGDTLEFHKFYKNISTGLKDIVWKAEPIDEEKYDGASTSK 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01430 463 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Car01g01430 463 Pfam NAF domain 324 384 IPR004041 GO:0007165
Car01g01430 463 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Car01g01430 463 Gene3D Transferase(Phosphotransferase) domain 1 105 286 - -
Car01g01430 463 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01430 463 CDD CIPK_C 328 443 - -
Car01g01430 463 PANTHER SERINE/THREONINE KINASE 19 452 - -
Car01g01430 463 ProSiteProfiles NAF domain profile. 322 346 IPR018451 GO:0007165
Car01g01430 463 Pfam Protein kinase domain 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01430 463 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01430 463 CDD STKc_SnRK3 24 279 - -
Car01g01430 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Car01g01430 463 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 19 452 - -
Car01g01430 463 Gene3D Kinase associated domain 1, KA1 322 447 - -
Car01g01430 463 Gene3D Phosphorylase Kinase; domain 1 14 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01430 Car-Chr1 23310976 23318410 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01430 14 455 CBL-interacting serine-threonine protein kinases AT1G01140 66.964 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car01g01430 Pkinase 6.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01430 - - gmx:100788746 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00740 07 6574302 6576268 Car01g01430 01 23310976 23318410 PCT