Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01428 ATGGGATTCCGGAAGATCGACATAGACAAATGGGAGTTTTTCAATGAAGGATTCCAGAAAGGAAAGAAGCATTTACTGAAGAACATTCAAAAGCGAAGGTCGTCTCAATCGCAACAAGTTGGTAACTATGTTGGAACTTCTTCTTCTTCTTCCAATGCTGCAGGGAAATCTGGAGTTGAAATTGAGGTAGAAAAATTGAAAAAGGAAAGAAGTGTGCTAATGCAAGAAATGATTGAATTGCAGCAACAACAACGAGTGACAGCTCGTCATGCAGGTATTGTGAATCAAAGGCTTCAATCAGCTGAACAAAGACAGAAACAAATGTACCAGCTCAGTCGTCAGCTAGCAGGCACTAAATTATCAAGCAACAAGACAATCAGAAGGATCCGTGTTCGAGGGGGTAATGTGAAGTGGAGAGAACTTAGATTGGATACCGGTAACTTCTCATGGGGAAGTGAAGCAGTTGATGCTGCACCATTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGAAATTGGTAGAAACATCACTATGGTGTTGAAATTGGTAGAAAAAAGAAATCAGCTGCAACCAAGAAGGATTCTGCAGAGTAGTTGGCTCTTCTTTCAAATCGGATGTCTTTTTTCTCAAGATCATCAACTAGATTCCCACATTGAAGAGCAGTTTGGTGGTGGTTGTTTGCTGGCCTGTATTTCATCTCGTCCAGGTCAATGTGGCAGGATTCATGGATACATCCTCGAAGGTAAGGAACTGAAATTTTCCATGAAGAAGTTACAGAGGAAGAAGGGAAATGGTGCTGCTTAA 804 0.4154 MGFRKIDIDKWEFFNEGFQKGKKHLLKNIQKRRSSQSQQVGNYVGTSSSSSNAAGKSGVEIEVEKLKKERSVLMQEMIELQQQQRVTARHAGIVNQRLQSAEQRQKQMYQLSRQLAGTKLSSNKTIRRIRVRGGNVKWRELRLDTGNFSWGSEAVDAAPFKQWYLQHYGVEIGRNITMVLKLVEKRNQLQPRRILQSSWLFFQIGCLFSQDHQLDSHIEEQFGGGCLLACISSRPGQCGRIHGYILEGKELKFSMKKLQRKKGNGAA 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01428 267 Gene3D - 207 262 - -
Car01g01428 267 MobiDBLite consensus disorder prediction 33 56 - -
Car01g01428 267 Gene3D Ribosomal protein S8e, subdomain 160 190 IPR042563 -
Car01g01428 267 Coils Coil 56 83 - -
Car01g01428 267 MobiDBLite consensus disorder prediction 33 58 - -
Car01g01428 267 PANTHER 40S RIBOSOMAL PROTEIN S8 155 267 - -
Car01g01428 267 PANTHER 40S RIBOSOMAL PROTEIN S8 103 155 - -
Car01g01428 267 Pfam Ribosomal protein S8e 101 155 IPR022309 -
Car01g01428 267 Gene3D - 115 159 - -
Car01g01428 267 PANTHER 40S RIBOSOMAL PROTEIN S8 155 267 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car01g01428 267 PANTHER 40S RIBOSOMAL PROTEIN S8 103 155 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01428 Car-Chr1 22911605 22914276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01428 104 255 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 52.941 4.00e-55 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01428 K02995 - gmx:100500112 201.445