Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01427 ATGCAACATCTCCATAATATAACATCATCCCAATTTCATccacccaccctcaacaccaccaccgacaccaccaccaTGTTTCCAGCTGCTAGAACCATAGCTTTACACTCATCATCCCTATGCACAGTCTCTTCTTCTGATAAACCATCATTCCCTTCTTCTAATCCAAAATCAAACACCCATTTATCTTCAAAACCCAAAAGTCTCCTTCAAAACCACCCACTTTACACACCAACACATGAAAAAATCTCACTTCAATTCAAAGAGAAAATCCTCTGTCTTGAAGTAATGGGTGTTGATGCAAGTAAAGCACTTTCTCAAAACCCTCAACTTCACTCAGCTACCTTAGAATCCATTCATTCCATTATCTCCTTTCTTCTCTCTAAAGGCATTCAACATAAAGACTTACCAAGAATCTTTGGCATGTGTCCAAAGATTCTGACTTCTGGCATAAAAAATGATCTTGAACCTGTTTTTGATTTTCTCATGCAGGATCTTAAAGTCCCTGATCATAGCTTTAGAAAAGTGATTAAAAAGTGTCCAAGATTGCTTACTTCTAGTGTTATAGATCAGCTTAAACCAGCTTTGTTTTACTTAAAGAGACTTGGTTTAAGGGATTTAGAAGCATTGGCTTATCAAGATTGTGTTTTATTGGTTTCCAATGTTGAAAGGACACTTATTCCTAAACTAAAGCATTTGGAGAGTATTGGATTTTCCAAAGAAGAAACTAGATGTATGGTTTTGAGGTGTCCTGCATTGTTGACTTTCAGCATTGAGAATAATTTTCAGCCTAAATTTGAGTATTTTTCTCTGGAAATGAGGAGGAAATTGGAGGAGTTGAAAGAGTTTCCTCAGTATTTTTCTTTTAGTTTGGAGAATAGGATTAAGCCTAGATATATGGAGGTCGTTCAGAGTGAGGTCAATTTGCCTTTGTCATTGATGCTTAAAAGTACTGATGATGAATTTAGGGAGCTGATAAAGAAAAGGGGGGGATGA 996 0.3464 MQHLHNITSSQFHPPTLNTTTDTTTMFPAARTIALHSSSLCTVSSSDKPSFPSSNPKSNTHLSSKPKSLLQNHPLYTPTHEKISLQFKEKILCLEVMGVDASKALSQNPQLHSATLESIHSIISFLLSKGIQHKDLPRIFGMCPKILTSGIKNDLEPVFDFLMQDLKVPDHSFRKVIKKCPRLLTSSVIDQLKPALFYLKRLGLRDLEALAYQDCVLLVSNVERTLIPKLKHLESIGFSKEETRCMVLRCPALLTFSIENNFQPKFEYFSLEMRRKLEELKEFPQYFSFSLENRIKPRYMEVVQSEVNLPLSLMLKSTDDEFRELIKKRGG 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01427 331 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 44 328 - -
Car01g01427 331 MobiDBLite consensus disorder prediction 46 73 - -
Car01g01427 331 PANTHER CGI-12 PROTEIN-RELATED 44 328 IPR003690 GO:0003690|GO:0006355
Car01g01427 331 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Car01g01427 331 SMART mt_12 244 276 IPR003690 GO:0003690|GO:0006355
Car01g01427 331 SMART mt_12 277 310 IPR003690 GO:0003690|GO:0006355
Car01g01427 331 SMART mt_12 102 132 IPR003690 GO:0003690|GO:0006355
Car01g01427 331 SMART mt_12 174 205 IPR003690 GO:0003690|GO:0006355
Car01g01427 331 SMART mt_12 137 169 IPR003690 GO:0003690|GO:0006355
Car01g01427 331 Gene3D Transcription termination factor 3, mitochondrial 67 329 IPR038538 -
Car01g01427 331 MobiDBLite consensus disorder prediction 1 23 - -
Car01g01427 331 Pfam mTERF 218 322 IPR003690 GO:0003690|GO:0006355
Car01g01427 331 Pfam mTERF 94 206 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01427 Car-Chr1 22674563 22675841 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car01g01427 mTERF 4.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01427 K15032 - gmx:100788221 444.121