Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01425 aTGTTTCCAGCTGCTAGAACCATAGCTTTACACTCATCATCCCTATGCACAGTCTCTTCTTCTGACAAACCATCATTCTCTTCTTCTAATCCAAAATCAAACACCCATTTATCTTCAAAACCCAAAAGTCTCCTTCAAAACCATCCACTTTACACACCAACACATGAAAAAATCTCACTTCAATTCAAAGAGAAAATCCTCTGTCTTGAAGTAATGGGTGTTGATGCAAGTAAAGCACTTTCTCAAAACCCTCAACTTCACTCAGCTACCTTAGAATCCATTCATTCCATTATCTCCTTTCTTCTCTCTAAAGGCATTCAACATAAAGACTTACCAAGAATCTTTGGCATGTGTCCAAAGATTCTGACTTCTGACATAAAAAATGATCTTGAACCTGTTTTTGATTTTCTCATGCAGGATCTTAAAGTCCCTGATCATAGCTTTAGAAAAGTGATTAAAAAGTGTCATAACTCATATTTTAATTCCTTTGTACTGACTCTTTAA 504 0.3552 MFPAARTIALHSSSLCTVSSSDKPSFSSSNPKSNTHLSSKPKSLLQNHPLYTPTHEKISLQFKEKILCLEVMGVDASKALSQNPQLHSATLESIHSIISFLLSKGIQHKDLPRIFGMCPKILTSDIKNDLEPVFDFLMQDLKVPDHSFRKVIKKCHNSYFNSFVLTL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01425 167 PANTHER CGI-12 PROTEIN-RELATED 20 155 IPR003690 GO:0003690|GO:0006355
Car01g01425 167 MobiDBLite consensus disorder prediction 17 46 - -
Car01g01425 167 SMART mt_12 77 107 IPR003690 GO:0003690|GO:0006355
Car01g01425 167 SMART mt_12 112 144 IPR003690 GO:0003690|GO:0006355
Car01g01425 167 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 20 155 - -
Car01g01425 167 Pfam mTERF 69 154 IPR003690 GO:0003690|GO:0006355
Car01g01425 167 Gene3D Transcription termination factor 3, mitochondrial 39 162 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01425 Car-Chr1 22593440 22594150 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car01g01425 mTERF 5.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01425 K15032 - gmx:100788221 213.772