Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01416 ATGGCCAAACCAATAATGGAGACAATCAAACTGCTGATGGGGTCATCAGCTGGGTTTGTTGGTGCTATCCAACCGGCATGCAGCAACACAGCATCTGCAGATTCAATATTAAGTAGTAAAACTGAACCGATTCTTAATTTTACGGCAAGGCAATCCCAATCAAACATTTCATTTTCCGGTGGTACCAAAGATGCTAGTGCTGGTAACTCTCAAGACTGTGGCGGTTCTGCAATGCATGTCTCGGGGGAGCCTCCCTGGCGTGTTCCTTTCGCTGAGAGTTCTACTCAATCTGCTAATCGCAGCAATGCTGTCATGCGTTATAAGGAAAAGAAAAAGAATCGAAAGTTTGATAAGAAAGTAAGATATGCTTCTCGGAAGGCTAGGGCTGATGTCAGAAAACGTGTGAAGGGCCGGTTCGTCAAAGCTGGAGCCTATATTTTCTTCAAGAGAAAGAAGACTGTTACCGAATGA 471 0.4459 MAKPIMETIKLLMGSSAGFVGAIQPACSNTASADSILSSKTEPILNFTARQSQSNISFSGGTKDASAGNSQDCGGSAMHVSGEPPWRVPFAESSTQSANRSNAVMRYKEKKKNRKFDKKVRYASRKARADVRKRVKGRFVKAGAYIFFKRKKTVTE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01416 156 MobiDBLite consensus disorder prediction 55 76 - -
Car01g01416 156 ProSiteProfiles CCT domain profile. 100 142 IPR010402 GO:0005515
Car01g01416 156 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 14 144 - -
Car01g01416 156 MobiDBLite consensus disorder prediction 55 102 - -
Car01g01416 156 Pfam CCT motif 100 142 IPR010402 GO:0005515
Car01g01416 156 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 14 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01416 Car-Chr1 22356777 22357965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01416 22 147 C2C2-CO-like Transcription Factor Family AT3G07650 61.069 4.47e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car01g01416 CCT 1.1e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01416 - - cam:101494523 264.233