Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01403 ATGGGAGACAGTGACATTGAAGGCGGTGGTGGTGGAGATGACGGTTTTCGTTCTCCGATCGGTCGCAAGTATCGTCCCGTCTTGGCTAACGATCGTGCTGTGCTTGAGATGTCGTCCATGGATCCAGGAtcttcttcttcctcttcttcttctGTTTTTCCAGATCAACTTCCTAATCTCAGGTATTCCTGCTCTTCGATCTATTTCGATGATTTCAGTTATTTTCAGGAATCTAAACTGGAACTATTCGGCTTTGATTCTCTTGTCAACATTCTTGGTCTCAAAAGCATGACTGGTGAGCAAACTGCACAGCCGTCTAGTCCTAGAGATGGTGAGGATATTACCATTACTGCTGGGCTGCCACTTCCAAAGCCTGATGCTCCCAAACTAGGTACAATGATGGGTGTATTCATTCCGTGTGTTCAGAGCATATTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGAGACATTGTTGCTTGTTTCTATGTGTGGCACTTGTACGTTCCTTACTTCAATATCATTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGGCCGTACTATCTCATAGGCCGTGCCCTTGGTCCAGAAGTTGGAGTTAGTATTGGTTTATGCTTCTTCCTTGGAAATGCAGTTGCTGGAGCACTGTACGTATTGGGAGCTGTAGAAACATTTTTGAAAGCAGTTCCTTCTGCTGGGATTTTTAGAGAGACTATCACACAAGTTAATGGTACTGCAATTGCACAGCCGATAGAGAGTCCAAGTTCACATGACCTGCAAATTTATGGGATTGTTGTTACTATTATGTTATGCTTTATTGTATTTGGAGGAGTAAAGATGATAAATCGGGTTGCCCCTGCGTTTCTCATACCTGTTTTATTCTCGCTTATCTGCATATATTTGGGAATTCTGTTGGCAAGGATGGATCATCCCACAGAGGGAATTACTGGTTTGAGTTTGGAGACTATTAAAGAAAATTGGAGTTCAGATTACCAAAAGACTAATAATGCTGGAATTCCACAACCTGATGGTTCTGTAACTTGGAATTTCAATTCTTTGGTGGGCCTCTTTTTCCCAGCAGTGACTGGAATAATGGCAGGTTCTAATCGATCATCTTCTCTAAAAGATACTCAACGATCTATTCCTGTTGGAACTTTAGCTGCAACTCTTGTGACTTCTTCTATGTATCTTATCTCTGTGATACTGTTTGGCGCCCTTGCCACCAGAGAGAAGCTTTTAACTGACAGGTTGCTTACTGCTACAGTTGCCTGGCCTTTTCCTTCATTAATTAAAATTGGGATTATTCTTTCAACCATGGGTGCTGCTCTTCAGAGTCTGACTGGTGCCCCACGTCTGCTTGCAGCTATAGCAAATGATGATATTTTACCTATTCTGAACTACTTTAAAGTTGCAGATGGCAATGAGCCACATGTTGCTACCCTTTTTACGGCTTTCCTATGTATTGGGTGTGTCATTATTGGAAATCTGGATCTTATCACTCCAACTGTGACCATGTTTTTCCTTCTGTGTTATTCTGGTGTCAACTTATCCTGCTTCCTTCTCGATCTACTAGATGCTCCTAGTTGGCGTCCTCGGTGGAAATTTCACCATTGGAGTTTGTCGCTTGTAGGAGCATTACTTTGCATAGTGATCATGTTCCTGATCTCTTGGTCATTCACTGTCGTTTCTTTGGCCCTTGCAAGCCTTATATATAAATATGTGAGCATCAAAGGAAAAGCTGGGGACTGGGGAGATGGTTTCAAAAGCGCTTATTTCCAacttgcacttcgtagtcttcggtcgctaggagCAAATCAAGTGCACCCAAAGAATTGGTATCCAATTCCGCTTGTATTTTGTCGACCTTGGGGCAAACTGCCAGAAAATGTTCCGTGTCATCCCAAACTTGCAGACTTTGCTAACTGTATGAAGAAGAAAGGTCGAGGAATGACGATATTTGTTTCTATACTAGACGGGGATTACCAAGAATGTGCTGAAGATGCCAAGGCAGCTTGTAAACAACTTAGTACCTACATCGAGTACAAGAATTGTGAAGGTGTAGCAGAGATTGTTGTGGCTCCTAACATGTCTGTAGGCTTTCGTGGCATTGTCCAAACAATGGGCCTTGGCAACCTCAAGCCAAACATTGTAGTGATGCGTTATCCAGAAATCTGGCGCCGGGAGAACTTAACAGACATCCCTGCTACTTTTGTTGGTATAATTAATGATTGTATTGTTGCAAACAAGGCAGTAGTTATAGTGAAGGGTCTCGATGAATGGCCAAATGTGTACCAGAAGCAATACGGTACGATTGATTTGTATTGGATTGTAAGAGATGGTGGTCTCATGCTGCTTCTCTCTCAATTGCTTCTCACCAAGGAGAGCTTCGAGAGTTGTAAGATTCAGGTTTTTTGTATTGCAGAAGATGACGCAGATGCAGAGGGGCTGAAAGCTGATGTTAAAAAATTCCTCTATGATCTTCGGATGCAAGCAGAAGTGTTTGTCATAACAATGAAATGGGATGTACAAGTGGATAGTGGGTCTCCCCAAGACGAGTCATTAGAAGAATTTACCAGTGCTAAACAAAGAATTGTTGATTATTTAACTCAAATGAAAGCAACAGCAGAAAGAGAAGGTACCCCTCTAATGGCAGATGGTAAACCTGTGGTTGTTAACGAGAAGCAAGTGGAGAAGTTTTTATACACAACGCTTAAACTCAATTCGATAATTTTGAGATACTCAAGAATGGCTGCTGTTGTGTTAGTAAGTCTTCCTCCACCTCCAGTGAGCCACCCAGCATATTTCTATATGGAGTACATGGATCTGTTACTGGAGAATGTGCCCAGGATTTTGATTGTAAGAGGATATCGTAGAGATGTTGTAACTCTATTTACATAG 2931 0.4149 MGDSDIEGGGGGDDGFRSPIGRKYRPVLANDRAVLEMSSMDPGSSSSSSSSVFPDQLPNLRYSCSSIYFDDFSYFQESKLELFGFDSLVNILGLKSMTGEQTAQPSSPRDGEDITITAGLPLPKPDAPKLGTMMGVFIPCVQSILGIIYYIRFSWIVGMAGIGETLLLVSMCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETITQVNGTAIAQPIESPSSHDLQIYGIVVTIMLCFIVFGGVKMINRVAPAFLIPVLFSLICIYLGILLARMDHPTEGITGLSLETIKENWSSDYQKTNNAGIPQPDGSVTWNFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLVTSSMYLISVILFGALATREKLLTDRLLTATVAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGNEPHVATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLVGALLCIVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMTIFVSILDGDYQECAEDAKAACKQLSTYIEYKNCEGVAEIVVAPNMSVGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTDIPATFVGIINDCIVANKAVVIVKGLDEWPNVYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEDDADAEGLKADVKKFLYDLRMQAEVFVITMKWDVQVDSGSPQDESLEEFTSAKQRIVDYLTQMKATAEREGTPLMADGKPVVVNEKQVEKFLYTTLKLNSIILRYSRMAAVVLVSLPPPPVSHPAYFYMEYMDLLLENVPRILIVRGYRRDVVTLFT 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01403 976 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 15 975 IPR004842 GO:0006811|GO:0015377|GO:0016021
Car01g01403 976 Pfam Solute carrier family 12 777 975 IPR018491 GO:0006811|GO:0016020|GO:0022857
Car01g01403 976 Pfam Solute carrier family 12 645 766 IPR018491 GO:0006811|GO:0016020|GO:0022857
Car01g01403 976 Pfam Amino acid permease 135 611 IPR004841 GO:0016020|GO:0055085
Car01g01403 976 MobiDBLite consensus disorder prediction 1 23 - -
Car01g01403 976 Gene3D Amino acid/polyamine transporter I 128 593 - -
Car01g01403 976 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 15 975 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01403 130 976 Inorganic Solute Cotransporters AT1G30450 83.274 0.0 1456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01403 K14427 - gmx:100795205 1703.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01403 01 21692730 21710763 Car01g01403 01 21692730 21710763 ECH