Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01361 ATGTATAATATTACATATAAAGATACACAAACATATATTAGTATCACGAAAACTGTATATTACCCCTTCATAGGCGGAGAAGGTAGTACAGGAGGAAGGGAAACGGGTGGAACACTAGGGATATTCAGAGGAGGAATGGATAAGGGTGGGGCAGTAGGGATATTTAGAGGAGGTAATGGAGTATTTAGAGGAGGTAATGGAGGTAAAGGAAATGTAGGGATTGCTAATGTGTATCATCGAGACCTGAAGCCAAAGAATATACTGGCCAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCTTTCAATGACACTCCAACAACTGTATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCACCAGAGCTCTGTGGATCATTTTACTCAAAGGTATAG 417 0.3957 MYNITYKDTQTYISITKTVYYPFIGGEGSTGGRETGGTLGIFRGGMDKGGAVGIFRGGNGVFRGGNGGKGNVGIANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFYSKV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01361 138 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01361 138 Gene3D Transferase(Phosphotransferase) domain 1 74 133 - -
Car01g01361 138 SUPERFAMILY Protein kinase-like (PK-like) 76 133 IPR011009 -
Car01g01361 138 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 74 137 - -
Car01g01361 138 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 74 137 - -
Car01g01361 138 Pfam Protein kinase domain 76 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01361 Car-Chr1 19780383 19786890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01361 75 137 MAP Kinase Gene Family AT2G42880 98.413 2.39e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Car01g01361 Pkinase 3.9e-16 CL0016