Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01345 ATGGCGTCCGATCTAAATTCAGGGTTATCGAAGAAAACATTTGTTTTTGGATTGAAAGTTTGGGTATTAATGGGAATAATGGTTGGTTTATTCATTATAATCATTCTGATTGTGCTATCAATATGTCTTACTTTAAGAAAGAAATCCAGAAAAAGCAGTGGCATGTTTCCTCTTAGTCATATTCTATCCATTTCACAAGAGATCAAAGAAATTAGCATCGATCAAGCTTCATCGAATAGTTATATGCACAACGGCGGTTTTATGAGCTTGAACGACAAGTTTAGTGATGATGATTCCGGAAAAGTTTTGATCCAAACAAAGAATGGTGATAACAGTAGTCAATCAGGCTCATTAAATAATTTAGAGAAAGATGCTAATGGATCTCAATCGGGCGAAGATAGCGGTGTTCGGAGTGTTTCTGTTTACAGGTCTTCGTCACATCATCCTATATCTGCTCCGTCACCGTTGTCTGGTCTGCCTGAATTCTCTCACCTTGGATGGGGCCATTGGTTTACATTAAGGGACCTGGAATTTGCAACGAACCGGTTTTCGAAGGACAATATTATCGGTGAAGGTGGATATGGAGTTGTCTATGGAGGCCAACTTATTAACGGGAATCCTGTGGCCATTAAGAAACTCCTAAATAATTTAGGACAAGCTGAAAAGGAATTTAGAGTGGAAGTTGAGGCTATTGGTCATGTTCGGCATAAGAACTTGGTTCGACTTTTGGGCTTTTGCATTGAAGGCACTCACAGGTTATTGATTTATGAGTATGTTAACAATGGCAACTTAGAGCAGTGGCTTCACGGAGCCATGCGGCAGCATGGCTATCTTACTTGGGAAGCTCGGATGAAAATTCTCCTTGGAACAGCCAAAGCGCTGGCTTACTTGCACGAGGCGATCGAGCCAAAAATTGTACATCGAGATATTAAGTCTAGCAATATTCTAATCGATGATAGCTTTAATGCTAAAATATCCGACTTTGGTCTTGCTAAGTTACTAGGTGCTGGAAAGAGTCACATTACAACTAGAGTAATGGGTACTTTTGGATATGTTGCGCCGGAATATGCCAATTCTGGTTTGTTAAATGAGAAGAGTGATGTTTACAGCTTTGGTGTATTGCTTCTTGAAGCAATTACAGGAAGAGATCCGGTGGATTATAGCCGACCAGCAGCCGAGGTTTGTCACTGTCATTGGTTTTCCGTAGAAATCATAAAAACTCAATTTACTTGTAATGATGTATAA 1245 0.3984 MASDLNSGLSKKTFVFGLKVWVLMGIMVGLFIIIILIVLSICLTLRKKSRKSSGMFPLSHILSISQEIKEISIDQASSNSYMHNGGFMSLNDKFSDDDSGKVLIQTKNGDNSSQSGSLNNLEKDANGSQSGEDSGVRSVSVYRSSSHHPISAPSPLSGLPEFSHLGWGHWFTLRDLEFATNRFSKDNIIGEGGYGVVYGGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRLLIYEYVNNGNLEQWLHGAMRQHGYLTWEARMKILLGTAKALAYLHEAIEPKIVHRDIKSSNILIDDSFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVCHCHWFSVEIIKTQFTCNDV 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01345 414 SUPERFAMILY Protein kinase-like (PK-like) 157 392 IPR011009 -
Car01g01345 414 MobiDBLite consensus disorder prediction 105 140 - -
Car01g01345 414 Gene3D Phosphorylase Kinase; domain 1 164 258 - -
Car01g01345 414 Pfam Protein kinase domain 184 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01345 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Car01g01345 414 PANTHER OS01G0323000 PROTEIN 2 402 - -
Car01g01345 414 PANTHER RECEPTOR-LIKE KINASE PLANT 2 402 - -
Car01g01345 414 ProSiteProfiles Protein kinase domain profile. 183 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01345 414 ProSitePatterns Protein kinases ATP-binding region signature. 189 212 IPR017441 GO:0005524
Car01g01345 414 Gene3D Transferase(Phosphotransferase) domain 1 259 410 - -
Car01g01345 414 SMART serkin_6 183 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01345 Car-Chr1 19153959 19158895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01345 17 399 Trihelix Transcription Factor Family AT1G70460 41.667 6.06e-84 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Car01g01345 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01345 - - gmx:732653 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01345 01 19153959 19158895 Car01g01345 01 19153959 19158895 ECH
Car07g00451 07 3961494 3966079 Car01g01345 01 19153959 19158895 PCT