Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01337 ATGGTGATCATAGACCAAGGGAGGAACAAAGAAGAAAAGGGTATGCGATTGGGGAAATACGAATTGGGTAAGACACTTGGAGAAGGGAATTTTGGAAAAGTTAAGTTGGCAAGGAACACAGATTCTGGACAATTTTATGCTGCTAAGATTCTTGAAAAGAACAAGATCATTAATCTTAATAACACTGATCAGATAAAGAGGGAGATATCCACGTTGAAGCTTCTGAAGCATCCAAATGTTGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAAAATTTATATGGTACTTGAGTACGTGAATGGAGGAGAGTTATTTGACAAAATTTCATCGAAAGGAAAACTTACAGAAGCTCATGGTAGGAAGATGTTTCAACAATTGATCGATGGTGTGAGTTACTGTCACAATAAAGGTGTCTTCCACAGGGATCTTAAGCTTGAGAATGTACTTCTGGATGCCAAAGGGAACATAAAGATTACTGATTTTAATCTTAGTGCTTTGCCCCAACATTGTGGGGCAGATGGATTACTACATACAACTTGTGGAAGTCCTAATTATGTTGCTCCTGAGATTCTTGCTAATAGAGGTTATGACGGAGCGAAATCAGATATTTGGTCATGTGGCATTATCTTATATGTAATTCTAACAGGATACCTTCCTTTTGACGATAGAAATCTTGCAGTTCTTTATCAAAAGATTTTCAAAGGAGATGTTCAGATACCGAGATGGTTGTCGCCTGGTGCACAAAACATTATTAAGAGAATCCTCGATCCCAATCCTAAAAGTCGTATAACAATGTCTATGATCAAAGAAGACAAATGGTTTAAGGAAGGTTATAATCCTGTGAATCGAGACGACGAGGAAGAAGATGTGTCCAATGAAGATGAAGCATTTTCCATCCAAGAAGTGCCCCTTGAAACAGAACAGGGTAGTCCAGGATCACCAACACTTATCAATGCATTTCAGTTGATAGGAATGTCTTCATGCTTAGACCTCTCTGGATTTTTTGAGAAAGAGGATGTCTCGGAGAGGAAGATAAGATTTACATCAAACCATTCGCCAAAAGATTTGATAGAGAAGATAGAGGACATTGTAACAGAAATGGGATTTAGAGTTCAGAAGAAAAATGGAAAATTGAAAGTGATACAAGATAATAAAGCACATAAAAGTCTAGGAAGCCTCTCAGTCCATGCAGAGGTTTTTGAAATAGGTCTATCTTTGTATGTAGTAGAACTAAGAAAGTCTTATGGAGATGCTTCAGTATATAGACAATTGTGTAAGAAGTTATCAAATGATTTGGGTACAGGCAAGACACAACTAGTGAGCTCTGAAGATTTAAGCATATGA 1347 0.3742 MVIIDQGRNKEEKGMRLGKYELGKTLGEGNFGKVKLARNTDSGQFYAAKILEKNKIINLNNTDQIKREISTLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHNKGVFHRDLKLENVLLDAKGNIKITDFNLSALPQHCGADGLLHTTCGSPNYVAPEILANRGYDGAKSDIWSCGIILYVILTGYLPFDDRNLAVLYQKIFKGDVQIPRWLSPGAQNIIKRILDPNPKSRITMSMIKEDKWFKEGYNPVNRDDEEEDVSNEDEAFSIQEVPLETEQGSPGSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNHSPKDLIEKIEDIVTEMGFRVQKKNGKLKVIQDNKAHKSLGSLSVHAEVFEIGLSLYVVELRKSYGDASVYRQLCKKLSNDLGTGKTQLVSSEDLSI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01337 448 PANTHER - 10 441 - -
Car01g01337 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Car01g01337 448 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Car01g01337 448 SMART serkin_6 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01337 448 Gene3D Kinase associated domain 1, KA1 317 435 - -
Car01g01337 448 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01337 448 Pfam NAF domain 315 374 IPR004041 GO:0007165
Car01g01337 448 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Car01g01337 448 PANTHER CBL-INTERACTING PROTEIN KINASE 21 10 441 - -
Car01g01337 448 SUPERFAMILY Protein kinase-like (PK-like) 17 292 IPR011009 -
Car01g01337 448 CDD CIPK_C 319 430 - -
Car01g01337 448 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01337 448 Gene3D Transferase(Phosphotransferase) domain 1 10 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01337 Car-Chr1 18895662 18902854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01337 83 439 CBL-interacting serine-threonine protein kinases AT3G17510 72.067 4.46e-177 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car01g01337 Pkinase 3.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01337 K07198 - gmx:100815660 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01337 01 18895662 18902854 Car01g01337 01 18895662 18902854 ECH
Car07g00447 07 3932892 3938776 Car01g01337 01 18895662 18902854 PCT