Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01334 ATGGAAGAAAATATTGAAATAAAGAAATTGCTCGAAGTTGATGAAAAGCAAACATATGATCACAACAATATAGATTTGCAAAACACCAAGGAAACCTCATCCTTTCATAACAATACCATTGGAAATATACGAGTGAAGCTAGATGAAGCAAAGAAGGAGAATGAGAATTTAAGATCTATGCTAAATCTGGTCAACGAACGATGCAATGTTCTTCAAAATCACCTACTTTTGGCAATGCATATGCATCAATTATCTTCATCGCCTCAAAATAATCACAACATGCCGAAGGGAAGTAGACAAGATGAGGAGGAACCAATCTTACCAACTCGACAGTTCTTAAATATTGATGAGCCTTCACCTTCATATAGTAGCAAAAAAGAAGGATTTTCCTTAGTAGAAAGCAATGAGAACAACAAGGGAAGAAAGTTTGCATGTGAGGACATTAATATTAATAATGAAGATAGTATTAATCATGAAGGTGAAATTAATAGCAAAATAAAATCGCAAGAACAAATGGAGGATCAAACATCTAAGGTTACTTGCACGAGAGCTAGAGTGTCCATAAGGGCTCGATCACATTTTTCTTTGATGGTTGATGGATGTCAATGGAGAAAATACGGTCAAAAGACAGCGAAGGGCAACCCTTGTCCTCGAGCTTATTATCGTTGTAGTATGGGAAATTCTTGTCCAGTTCGTAAGCAGGTACAAAGGTGTTTTAAGGATGAAACTATTTTCATCACAACCTATGAAGGAAACCATAATCATCAACTTCCACCAACAGCAAGACCAATGGCAAGTTTAACATCATCTGCACTCAACACACTCCTTTCTACCTCAACAACAAATTTACAATATGGCAACACATTCATCTTCTCTTCACCATTTTCACCTCCAAACTCCACAGCTATAGCTACTTTCTCACCCTCTCCAACATGTCCTACAATAACACTTGATTTCACAATTCCCTATAGTAACAATTTCCAATTCAAAAAGAACACTTCCACACCATTATTCCCTTTTCCATTGCAATCATTTGAAGGGTTTCCTTCAATGATAAACAAAGAGAGGAAACTTGCATTAGTTGATGTTGTGAGTGAAGCTATAGAAAAAAATCCTTCTCTCAAAGCTTCATTATTTGAAGCTATGTCCTCATTCACAAATGTAAATCCTTTAAACATTAACAACCATATACAAATTAAGTAG 1203 0.3574 MEENIEIKKLLEVDEKQTYDHNNIDLQNTKETSSFHNNTIGNIRVKLDEAKKENENLRSMLNLVNERCNVLQNHLLLAMHMHQLSSSPQNNHNMPKGSRQDEEEPILPTRQFLNIDEPSPSYSSKKEGFSLVESNENNKGRKFACEDININNEDSINHEGEINSKIKSQEQMEDQTSKVTCTRARVSIRARSHFSLMVDGCQWRKYGQKTAKGNPCPRAYYRCSMGNSCPVRKQVQRCFKDETIFITTYEGNHNHQLPPTARPMASLTSSALNTLLSTSTTNLQYGNTFIFSSPFSPPNSTAIATFSPSPTCPTITLDFTIPYSNNFQFKKNTSTPLFPFPLQSFEGFPSMINKERKLALVDVVSEAIEKNPSLKASLFEAMSSFTNVNPLNINNHIQIK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01334 400 ProSiteProfiles WRKY domain profile. 192 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car01g01334 400 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 28 397 - -
Car01g01334 400 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 397 IPR044810 GO:0003700
Car01g01334 400 Gene3D WRKY domain 181 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car01g01334 400 Coils Coil 40 67 - -
Car01g01334 400 MobiDBLite consensus disorder prediction 85 104 - -
Car01g01334 400 SUPERFAMILY WRKY DNA-binding domain 191 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car01g01334 400 SMART WRKY_cls 197 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car01g01334 400 Pfam WRKY DNA -binding domain 199 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01334 Car-Chr1 18637437 18641893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01334 41 320 WRKY Transcription Factor Family AT4G04450 39.935 4.12e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car01g01334 WRKY 6.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01334 - - cam:101498660 763.066