Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01324 ATGGATGGTGTCACTGTGAAGGTTGAGCCAGAGCAGTTTATGGTTCTAGAATCTTCTTCTATAGCTGCTGATTGTGTTGATGGCGTTAGTTCCAATATGGGTGATGTGTCAATGATGAATCTCTCAGGAAACAAGTCGATGCCATCATCTGGATTGAATGCAGTGATTCCTAATACAAGTCAACTTACCATCTTCTATAATGGGAGTATTTGTATCTATGATGGAATACCTGCAGAAAAGGTTCATGAAATAATGCTCATTGCTGCTGCTTCTGCCAAGTCAACTGAAATGAAGAAGATTGGGAAACAATCTCCCATCCTTTCAACTGTTCCCACAAGGCCTTCTTTTCCACATGGAACGATTGATAATATCGCTTCGCCGCAGGCACTCTGCTTTCCTGCAAAGAATAGTTCTATCTGCAAGCTGCAAGAATTTCCGATAGCACGCAGACATTCACTTCAAAGGTTTCTTGAGAAGCGGCGAGACAGGTTGGGTAGTAAAGCCCCTTATCCTTCGTCTCCATCAACAAAGGTGGCTGACAACTTAGAGAACAACTTATGTGCCGACAATTCGCCAGATTCGGTTTCCTTGAAACGCCCAGATGAGAAATTTCAACCAACTATATCTGCCTCTTGA 636 0.4292 MDGVTVKVEPEQFMVLESSSIAADCVDGVSSNMGDVSMMNLSGNKSMPSSGLNAVIPNTSQLTIFYNGSICIYDGIPAEKVHEIMLIAAASAKSTEMKKIGKQSPILSTVPTRPSFPHGTIDNIASPQALCFPAKNSSICKLQEFPIARRHSLQRFLEKRRDRLGSKAPYPSSPSTKVADNLENNLCADNSPDSVSLKRPDEKFQPTISAS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01324 211 MobiDBLite consensus disorder prediction 162 211 - -
Car01g01324 211 SMART tify_2 55 90 IPR010399 -
Car01g01324 211 Pfam Jas motif 146 170 IPR018467 -
Car01g01324 211 MobiDBLite consensus disorder prediction 169 192 - -
Car01g01324 211 ProSiteProfiles Tify domain profile. 55 90 IPR010399 -
Car01g01324 211 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 25 188 IPR040390 -
Car01g01324 211 Pfam tify domain 57 89 IPR010399 -
Car01g01324 211 PANTHER DIVERGENT CCT MOTIF PROTEIN 25 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01324 Car-Chr1 18379367 18382764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01324 6 173 Tify Gene Family AT5G20900 43.023 3.80e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Car01g01324 tify 6.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01324 K13464 - gmx:100306524 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00421 07 3736293 3739299 Car01g01324 01 18379367 18382764 PCT