Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01320 ATGACTAATTCTTCAACAAATAAGGTACCATCTCCAACAAAACCAACACCATTCACATTCATTTTAATAACGTTGGTGTTGTGCACTCCATTCTGTTTCTGTGATCCCACTAGAACCACTGGATTAGAGTTTCTTAAGGTTGCTCCTTCTGAATTTGCTGATTCAGTGAAAGATGTAGTTGACATTTTGCAAAATGTTATGTCTATGCTTTCTGAATTTGGTGGTGTTGGCTTTGGTGATTCGCGTCTGTCTAATGCTGTTTCTGATTGCCTTGATTTGCTTGACCTTTCTTCCGATGCACTTACTTGGTCTGTCTCTGCTACTCAGAACCCCAAAGGTAGTAAGTATAACAGTACTGGGAATATGAGCTCTGATTTAAGAACATGGTTAAGTGCTGCACTTGCACATCCTGTGCACTTGCACATCCTGAGACATGCATGGACGGATTTGAAGGCACAAATGGCATTATGA 471 0.4055 MTNSSTNKVPSPTKPTPFTFILITLVLCTPFCFCDPTRTTGLEFLKVAPSEFADSVKDVVDILQNVMSMLSEFGGVGFGDSRLSNAVSDCLDLLDLSSDALTWSVSATQNPKGSKYNSTGNMSSDLRTWLSAALAHPVHLHILRHAWTDLKAQMAL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01320 156 Pfam Plant invertase/pectin methylesterase inhibitor 79 136 IPR006501 GO:0004857
Car01g01320 156 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 136 IPR035513 -
Car01g01320 156 PANTHER PECTINESTERASE 46 137 - -
Car01g01320 156 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 46 137 - -
Car01g01320 156 CDD PMEI-like_4 18 135 - -
Car01g01320 156 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 139 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01320 Car-Chr1 18315372 18317284 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01320 18 136 Carbohydrate Esterase AT3G43270 44.167 3.72e-24 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01320 K01051 - gmx:100777500 138.658