Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01316 ATGCTATCTCACCGTCTAAACAAACCATCTTTGTTCATGTttttcattttcattttcttttgcactcagtttgattcttctattGTTGGCTTTAGTCTAAATAGTCTAAAGAGACTAGAGTGTTTGAATGTGACTCCTTATGAGTTTGTTGTTTCCTTGAAAACTAAAGAGGATGTGTTGCAGGATGTTACATCTATTCTGCAGTTTGAGCTCACCCATGTTAATGGTGTTGACGACTTTCGTCTCTCTAACGCCATTTCAACATGTTTGAAATTGCTAGACTTGTCCGTCAAAGAACTCGATTGGTGTAGATTTGCTGTTGAGAGTTCGAAAGGAAAATATAATGGTACAAGTAACCTTGGTCGTGATTTACGGACATGGTTAAGTGCTATTCATGCTAATAGCGACACATGCATGGATGAACTTAAAAAAACCAGTGTTAACATGAATGATAAAATATCCACAAAAATTGACAAGGTCGATTCCCTGATTTATGATCTCCTCATCAAAGTGGAGGTGCAACCAATCTCTGACCACTCTGCCAACAAGGGCCGATTTCCTTCTTGGGTAGTCCGAAGCGACAAAAAGCTATTGCAGACAAATGCACCTCATATTTTTGATGTTGTAGTTGCAGCTGATGGTACTGGAGATTTTACTACAGTGATGGAGGCGGTGCATGCAGCCCCAAGCTCTAGTGAGAAGCGTTATGTCATATTTATATAG 723 0.3762 MLSHRLNKPSLFMFFIFIFFCTQFDSSIVGFSLNSLKRLECLNVTPYEFVVSLKTKEDVLQDVTSILQFELTHVNGVDDFRLSNAISTCLKLLDLSVKELDWCRFAVESSKGKYNGTSNLGRDLRTWLSAIHANSDTCMDELKKTSVNMNDKISTKIDKVDSLIYDLLIKVEVQPISDHSANKGRFPSWVVRSDKKLLQTNAPHIFDVVVAADGTGDFTTVMEAVHAAPSSSEKRYVIFI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01316 240 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 171 IPR035513 -
Car01g01316 240 CDD PMEI-like_4 31 168 - -
Car01g01316 240 Gene3D - 172 240 IPR012334 -
Car01g01316 240 Pfam Plant invertase/pectin methylesterase inhibitor 81 159 IPR006501 GO:0004857
Car01g01316 240 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 44 240 - -
Car01g01316 240 PANTHER PECTINESTERASE 44 240 - -
Car01g01316 240 SUPERFAMILY Pectin lyase-like 207 240 IPR011050 -
Car01g01316 240 Pfam Pectinesterase 207 240 IPR000070 GO:0030599|GO:0042545
Car01g01316 240 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 151 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01316 Car-Chr1 18253743 18254842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01316 4 240 Carbohydrate Esterase AT3G43270 36.800 6.39e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01316 K01051 - gmx:100801813 183.726