Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01303 ATGGGTTCAAGATCTGTGGAAGGAGAACAAGCATCACTCGCTGATGATTATGATGCCTTGATTTCAACCACTGATGTTGTGCTTCTCAAGCGAGCTTGGCGTAATGAGAAGGCAGCCCCTGAGATTCTTCATTTTGAATCTGATTTGATCACCCGCGTCAGAGAACAGATTGAATTGATGGAAGAAACTGTTGAGGAGAAATCGACCGTTGGTACCGACCCTCTTTCAGTATCTCTGTATCAGATGGACTTAGATAGAACCCTGTTTCTATTAAGGTCGTATCTTCGCATCCGCATCCAGAAGGTAACCAGCCATACGCTTTTAGTTTTTACACTCAAAGCAATAGGATTGTTATGGTTATTAACTCTTAAGTATAAATTATTTTCTGATTGCAGGTGCACAGATGACTTTAAGAAACATCTGGAGGAGAGTGTTCTATCAAAACTGCCTGAAAATTATCAGTCTTATGAGAGGCAATCTGTAATTAGTGAAGAGGATGACATGGTTCCAGAACCACGACTAGACACATTCGTTTTGTGTAGAAGTAAAGAATATCTCACCGGCATTCAACTTGAAGATGGACCTGTTGATGATAGGTCGAAGCTGTTTGAGATGGAGCCGGATGTCCTTTACTTCATATGTTACAAATCAATAAAGCCACTTGTAGAGAGTGGCAAAATTGATCTACTATGA 693 0.4055 MGSRSVEGEQASLADDYDALISTTDVVLLKRAWRNEKAAPEILHFESDLITRVREQIELMEETVEEKSTVGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKVTSHTLLVFTLKAIGLLWLLTLKYKLFSDCRCTDDFKKHLEESVLSKLPENYQSYERQSVISEEDDMVPEPRLDTFVLCRSKEYLTGIQLEDGPVDDRSKLFEMEPDVLYFICYKSIKPLVESGKIDLL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01303 230 Pfam DNA replication complex GINS protein SLD5 C-terminus 172 230 IPR031633 -
Car01g01303 230 Gene3D - 12 220 - -
Car01g01303 230 SUPERFAMILY GINS helical bundle-like 22 160 IPR036224 -
Car01g01303 230 PANTHER SLD5 PROTEIN 11 230 IPR008591 GO:0006261
Car01g01303 230 PIRSF GINS_Sld5 1 230 IPR008591 GO:0006261
Car01g01303 230 CDD GINS_A_Sld5 25 146 IPR038749 -
Car01g01303 230 SUPERFAMILY PriA/YqbF domain 174 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01303 Car-Chr1 17997528 18001524 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01303 1 168 Core DNA Replication Machinery Family AT5G49010 55.952 6.76e-54 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01303 K10735 - gmx:100784291 300.827