Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01298 ATGGAATACGGTGGAGGCTCAAAAGTAACAGGGATTAGGCAAATTGTGAGACTAAAAGAAATACTTCAAAAGTGGCAAAGTGTGACAATAGGCACAAAAACTCCAAACCTTAAACCCGAAGATGAAACTGACGATAGCAGATCGCCGATAATCAACAAAAGGATAGCGCGTATCGTAAGTTGTGACTCCGATGAAGAAAGCTGTCAAACTCCAGAACCACCACCTGATGTGCCAAAAGGTTACTTGGCTGTCTATGTTGGACCGGAGCTTAGACGGTTCATAATCCCAACTACCTACCTTAGCCATTCTTTGTTCAAAATGTTGCTGGAAAAGGCTGCTGAGGAATTTGGATTTGATCAGAGCGGCGGGCTCACGATACCGTGCGAGATTGAGACTTTTAAATACCTTCTCAATTGCATAGAGAATCAGGAGGAGAAAGAACAACATCATGACAACTTATCTGACAAATCAGAAACCTTGGAAGAGTAA 489 0.4254 MEYGGGSKVTGIRQIVRLKEILQKWQSVTIGTKTPNLKPEDETDDSRSPIINKRIARIVSCDSDEESCQTPEPPPDVPKGYLAVYVGPELRRFIIPTTYLSHSLFKMLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCIENQEEKEQHHDNLSDKSETLEE 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01298 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 161 IPR003676 GO:0009733
Car01g01298 162 Pfam Auxin responsive protein 58 140 IPR003676 GO:0009733
Car01g01298 162 PANTHER SMALL AUXIN-UP RNA-RELATED 7 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01298 Car-Chr1 17850214 17852494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01298 1 156 Calmodulin-binding Proteins AT5G20810 67.722 8.74e-71 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01298 K14488 - cpap:110808074 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01298 01 17850214 17852494 Car01g01298 01 17850214 17852494 ECH
Car07g00399 07 3491734 3493539 Car01g01298 01 17850214 17852494 PCT