Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01291 ATGCAAACCCATCTCACACTCATACTCTTCACTCTCTTCCTCTACTTATTTTTCACAGGCTCCGCCGCGGCCCATGATGAGGCCCAAGATCTGGTACGTTCCTCGTGCATTCACGCCAGGTACCCAAAGTTATGTCTCCGAACACTCTCTAACTACTCCGGGCCCGCTAAAAGCCCATTAGACATAGCCGAAGCTGCGCTTCGGGTTAGCTTGGCCCACGCGAGGAGAGCTTCTGAGTATCTAGGAGCTTCTAAAGGTGGGGCCCGCAGCAGCAGCTTGAGCAAACTGCAACGGGCTGCTCTAAGCGACTGCGAAGAGCTGATTTCAGATTCGGTGGATGAACTTCAAAGGAGTTTGGAGGAGTTGAAGCATCTAAGACAGGAAACGTTCCGGTGGCAGATGAGCAACGCCTTGACTTGGGTGAGTGCTGCACTCACTGACGGCGACACTTGCCTCGACGGGAATGTGGGGCCCGAAGTGAACCGGAGAGTTGCCGACGTTGCGAGGGTGACAAGTAATGCTCTATACTTGATCAATCGTCTTGGAGAAAGTGGAAAAGGGaagcccaagcccaagctcaatgctcagccaagatccaagAAATAA 606 0.4934 MQTHLTLILFTLFLYLFFTGSAAAHDEAQDLVRSSCIHARYPKLCLRTLSNYSGPAKSPLDIAEAALRVSLAHARRASEYLGASKGGARSSSLSKLQRAALSDCEELISDSVDELQRSLEELKHLRQETFRWQMSNALTWVSAALTDGDTCLDGNVGPEVNRRVADVARVTSNALYLINRLGESGKGKPKPKLNAQPRSKK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01291 201 CDD PMEI-like_3 34 181 - -
Car01g01291 201 SMART PMEI_2 27 177 IPR006501 GO:0004857
Car01g01291 201 MobiDBLite consensus disorder prediction 182 201 - -
Car01g01291 201 Coils Coil 108 128 - -
Car01g01291 201 Pfam Plant invertase/pectin methylesterase inhibitor 30 176 IPR006501 GO:0004857
Car01g01291 201 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 181 IPR035513 -
Car01g01291 201 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 182 IPR035513 -
Car01g01291 201 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 181 IPR006501 GO:0004857
Car01g01291 201 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 184 - -
Car01g01291 201 PANTHER PECTINESTERASE INHIBITOR 3 6 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01291 Car-Chr1 17440242 17441421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01291 31 184 Carbohydrate Esterase AT3G14310 29.091 3.19e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01291 - - gmx:100816686 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01291 01 17440242 17441421 Car01g01291 01 17440242 17441421 ECH