Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01288 ATGGAACGCAAGTCCACGCTTCTGCAATTCATTCTCCTTCTATTACCTTTAATTGCTTTTCCTGGAATCACTTCCAATGCAACACTTAATAATGAGACTTGCGGTCACTTCGATGCTTCACACACTAAAGCGCCATGCCCAAATGGTTGGGTTATTGACCCTAACAAGACCAAGTGCTTTCTCCATGTTGGGAGGCCTCAATCTTGGAATGATTCAGAGACATGCTGTAGTAAATATGGTGGACATTTAGCATCATTGGCATCGCTTCAGGAGTTACATTTTGCTCAAAGTTTATGTGGCGAATCCATCAATAGTTGCTGGATTGGTGGAAAAAGACACAACAATGCATCTGGTTTTCAGTGGATGTGGTCTGATAATTCTCAATGGAATAAGTCCATATTTCCTTTGGCTAATGTTCAACTTAATTGTACTGGAACTGGACTATCCTGTAATTGGAACAGTACAGATAATTTATGTACAGCAATGAGTAATAATTCAAAATTTCTCATGAGTGAGAGATGTGGTAATCCTCATGCTTCTCTGTGTATACTTGACTTAGATACAAAATGTAACCATATGCACTGCCACAGGGAGTACCTTATAATCCTTGCAGTGGTGAGTGGATTGATACTCTCGACAACATTAGCAGTGGTTGTCTGGCTTCTTGTATATAAGCGGGGCAAGAAGAGAAGACGATCTAGAAAACTATCTGATCTTGCCGCTTCACTTCCATCATGGAAAGTCTTTACCAAAGAGGAACTAAGGTCAATCACGAAAAACTTCAGTGAAGGAAACCGTCTTGTTGGGGATACAAAGACTGGTGGTACATACAGTGGGGTCCAACTAGATGGCTCAAAGGTTGCTGTTAAGAGATTGAAGAGATCAAGCTTTCAGAGGAAAAAAGAGTTCTATTCTGTAATTGGCAGGGTTGCAAGGCTTCGACATCCAAATCTGGTGGCTGTGATGGGATGCTGTTATGATCATGGTGACCGCTACATTGTTTATGAGTTTGTAGCTAATGGGCCCTTAGATAAATGGCTACATCACTTACCAAGGGGAGGTCGCAGCTTAGATTGGGCTATGAGGATGAAAATTGCAACAACGCTTGCTCAAGGAATAGCGTTTCTGCATGACAAGGTTAAGCCACAAGTTGTTCACCGAGATATACGAGCTAGTAATGTGCTGCTGGATGAGGAGTTTGGTGCACACCTTATGGGTGTTGGCTTGTCCAAATTTGTGCCATATGAAGTGATGCATGAGAGGACTGTGATGGCAGGTGGAACTTATGGGTATCTTGCTCCCGAGTTTGTGTACAGAAACGAGCTTACAACAAAGAGTGACGTTTATAGTTTCGGTGTCTTGCTACTTGAAATAGTTAGCGGGCGTAGACCAGCACAAGCAGTTGATTCTGTGGGTTGGCAGAGTATATTCGAATGGGCTACACCTCTTGTTCAAGCCAATCGCTACCCTGAACTCTTGGATCCTCATATATCTTCATCGTCTTCTAGTATCATCCCAGAGACTAGTGCTATCCAGAAGGTGGTTGACCTCGTTTATTCATGCACGCAGCATGTACCTTCTATGCGCCCTAGAATGTCTCATGTTGTTCATCAGCTGCAACAGTTTGCTCAGCCACCTGCAAAATAA 1647 0.4287 MERKSTLLQFILLLLPLIAFPGITSNATLNNETCGHFDASHTKAPCPNGWVIDPNKTKCFLHVGRPQSWNDSETCCSKYGGHLASLASLQELHFAQSLCGESINSCWIGGKRHNNASGFQWMWSDNSQWNKSIFPLANVQLNCTGTGLSCNWNSTDNLCTAMSNNSKFLMSERCGNPHASLCILDLDTKCNHMHCHREYLIILAVVSGLILSTTLAVVVWLLVYKRGKKRRRSRKLSDLAASLPSWKVFTKEELRSITKNFSEGNRLVGDTKTGGTYSGVQLDGSKVAVKRLKRSSFQRKKEFYSVIGRVARLRHPNLVAVMGCCYDHGDRYIVYEFVANGPLDKWLHHLPRGGRSLDWAMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPYEVMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQANRYPELLDPHISSSSSSIIPETSAIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQFAQPPAK 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01288 548 Gene3D Phosphorylase Kinase; domain 1 237 337 - -
Car01g01288 548 SMART CLECT_2 46 183 IPR001304 -
Car01g01288 548 SMART tyrkin_6 209 539 IPR020635 GO:0004713|GO:0006468
Car01g01288 548 ProSiteProfiles Protein kinase domain profile. 262 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01288 548 ProSiteProfiles C-type lectin domain profile. 55 183 IPR001304 -
Car01g01288 548 PANTHER - 1 544 - -
Car01g01288 548 Gene3D - 27 185 IPR016186 -
Car01g01288 548 Pfam Protein tyrosine and serine/threonine kinase 282 539 IPR001245 GO:0004672|GO:0006468
Car01g01288 548 Pfam Lectin C-type domain 66 182 IPR001304 -
Car01g01288 548 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 544 - -
Car01g01288 548 SUPERFAMILY Protein kinase-like (PK-like) 235 539 IPR011009 -
Car01g01288 548 Gene3D Transferase(Phosphotransferase) domain 1 338 544 - -
Car01g01288 548 ProSitePatterns Tyrosine protein kinases specific active-site signature. 384 396 IPR008266 GO:0004672|GO:0006468
Car01g01288 548 CDD CLECT 58 182 - -
Car01g01288 548 SUPERFAMILY C-type lectin-like 38 183 IPR016187 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01288 Car-Chr1 17366551 17372253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01288 76 545 Receptor kinase-like Gene Family AT1G52310 70.772 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Car01g01288 PK_Tyr_Ser-Thr 2.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01288 - - vra:106762676 924.465