Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01281 ATGCGAAAGCTTTTGATAGCCGTGACCCTTTGCGTTATTTTCATGGCCATTGAGGTAGTTGGTGGTATTAAGGCTAACAGTCTCGCAATATTGACTGACGCAGCACATTTGCTTTCCGACGTTGCAGCATTTGCCATCTCGTTGTTTTCTATATGGGCTGGGGGATGGGAACCGAATCCTCGCCAATCGTTTGGATTTTTTAGAATAGAGATTCTTGGCGCTTTGGTTTCTATGCAATTAATATGGTTGCTTGCTGGGATTTTGGTGTATGAAGCCATTGCTAGACTCATTGCAGGTCCTCAAAACGTGGATGGTTTTTTAATGTTCATAGTTGCTGCATTTGGTCTTCTGGTTAACATCATTATGGCTTTGGTATTGGGTCATGATCACGGCCACGGCCAAGGACATGATCATCATGGCCACAGCCATGGACTTTCTGTTTCTACCCATCATCACGATGTAAAGCATACAAAAGATGAGCATCATCACAGTCACGACGATCTCACTCACCATCATGATGATGAAAAGCATTCGAATGATGCACACCAACATATTCATGAAGATCACGAGCATCATCGTGACCATGAAGAGGTTACTCAACCACTTCTCAGTGAATCAAATGGCAGATCCGAGAAAAAGAAACGGAACATAAATGTACATGGCGCTTATCTCCATGTACTTGGGGACTCTATCCAGAGTGTTGGGGTAATGATTGGAGGAGCAATCATATGGTATAAGCCTGAATGGAAAATAGTTGATTTGATTTGCACTCTAATTTTTTCTGTAATTGTTTTGGCCACAACTATCAACATGCTGAGAAACATTTTGGAAGTCCTGATGGAGAGCACACCGCGCGAGATAGACGCTACTCAGCTTCAAAAGGGGCTGTTGGAGATGGAAGAAGTAGTAGCTGTTCATGAACTGCACATATGGGCCATTACAGTGGGGAAGGTATTGCTAGCTTGTCATGTTAAAATCAATCCCGAAGCAGATGCCGACGTGATGCTAGACAATGTTATAGACTACATCAAGAGGGCTCATCACATCAGTCACGTAACTATACAGATAGAACGCTAG 1077 0.4318 MRKLLIAVTLCVIFMAIEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWAGGWEPNPRQSFGFFRIEILGALVSMQLIWLLAGILVYEAIARLIAGPQNVDGFLMFIVAAFGLLVNIIMALVLGHDHGHGQGHDHHGHSHGLSVSTHHHDVKHTKDEHHHSHDDLTHHHDDEKHSNDAHQHIHEDHEHHRDHEEVTQPLLSESNGRSEKKKRNINVHGAYLHVLGDSIQSVGVMIGGAIIWYKPEWKIVDLICTLIFSVIVLATTINMLRNILEVLMESTPREIDATQLQKGLLEMEEVVAVHELHIWAITVGKVLLACHVKINPEADADVMLDNVIDYIKRAHHISHVTIQIER 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01281 358 Gene3D Cation efflux protein transmembrane domain 1 279 IPR027469 -
Car01g01281 358 SUPERFAMILY Cation efflux protein transmembrane domain-like 2 281 IPR027469 -
Car01g01281 358 MobiDBLite consensus disorder prediction 131 214 - -
Car01g01281 358 Pfam Cation efflux family 4 280 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Car01g01281 358 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 287 357 IPR036837 -
Car01g01281 358 TIGRFAM CDF: cation diffusion facilitator family transporter 2 358 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Car01g01281 358 PANTHER METAL TOLERANCE PROTEIN A1 1 358 - -
Car01g01281 358 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 358 - -
Car01g01281 358 MobiDBLite consensus disorder prediction 131 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01281 Car-Chr1 17141271 17142347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01281 1 358 Inorganic Solute Cotransporters AT3G58810 65.642 3.31e-153 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01281 K14689 - gmx:100794876 514.227