Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01274 ATGTCTACCTCATCGGAACACTCTGAGATTTCCGGCCAGAAACCGGCGAGGTCACCGGAAAAGTCAACTTTCTCTCAAACTTGCAGTTTATTGAGTCAATATATTAAGGAAAAGGGTAGCTTCAAAGATCTTTCTCTTGGGATGACATGCAACACCGACCCAATTGGGTCTCCTGAGACATCTTCTCATTCTGCAACAACCATGAACTTCTTTCCTAACAAGGAAAACAACTTGACACCAAAGAACCTTACAACCATGGATTTGCTCACTCCACAAGCTGCCTTGAACAATTCCAATGCTATTAAGGGACCTAAAGCTGCACAGTTGACGATGTTTTATGGCGGTCAAGTAATTGTATTTGATGATTTTCCAGCTGATAGAGCACATGAGCTTATGTCTTTTGCAAGCAAAGGAATCTCTCAAAGCCACAACAATTCTGTTTTCACTTACACACAGAGCCAGCCTTCGTTTCCGATTAATTTGGTCAGAACTTCCGCTGATTCAACCACTCCAATTGTTCCTAGTGTGAACATTGTCGCTAATACTGGCGCTGGCTCCGTTCTTGAACACCCTCAAGTTCCCTCTAGACCTATCGTTTGTGATCTGCCGATTGCGAGGAAAGCTTCGCTTCATCGGTTCCTGGAGAAGAGAAAGGATAGGTAA 663 0.4374 MSTSSEHSEISGQKPARSPEKSTFSQTCSLLSQYIKEKGSFKDLSLGMTCNTDPIGSPETSSHSATTMNFFPNKENNLTPKNLTTMDLLTPQAALNNSNAIKGPKAAQLTMFYGGQVIVFDDFPADRAHELMSFASKGISQSHNNSVFTYTQSQPSFPINLVRTSADSTTPIVPSVNIVANTGAGSVLEHPQVPSRPIVCDLPIARKASLHRFLEKRKDR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01274 220 MobiDBLite consensus disorder prediction 1 24 - -
Car01g01274 220 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 220 IPR040390 -
Car01g01274 220 SMART tify_2 102 137 IPR010399 -
Car01g01274 220 Pfam Jas motif 203 220 IPR018467 -
Car01g01274 220 PANTHER PROTEIN TIFY 10A 17 220 - -
Car01g01274 220 Pfam tify domain 104 136 IPR010399 -
Car01g01274 220 ProSiteProfiles Tify domain profile. 102 137 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01274 Car-Chr1 16902819 16905838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01274 2 220 Tify Gene Family AT1G74950 38.272 9.89e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Car01g01274 tify 2.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01274 K13464 - gmx:100801449 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01274 01 16902819 16905838 Car01g01274 01 16902819 16905838 ECH
Car07g00385 07 3384868 3387010 Car01g01274 01 16902819 16905838 PCT