Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01271 ATGGCCACTGCTGtccttctcctcctcctcctctctctctcctctttttctctctcCACCGCACAAGCACCACCCTCCGAAACCCAATCCCTCCTCAAACTAAAACAATCCTTCAAAAACTCCGACAAAATCTTATCGTCATGGATCCCCAACGTCTCCCCTTGTTCCGGCACATGGATAGGCGTCGTCTGCTTCAACAACATTATCACCGGTCTCCATCTCTCCGACCTAAGTCTCTCCGGAACAATCGACGTCGACGCAATCTCCGAGATTCGCGGCCTTCGTACCCTCAGCTTCGTCAACAACTCCTTCACCGGCCCCATTCCACAGTTCAACAAACTCGGAACCATCAAATCTCTTCTCCTCACGCAAAACCAATTCTCCGGTCCGATTCCTCAGGACTTCTTCTCGCATTTAAACTCTTTGAAAAAAATTTGGTTCTCCGGTAACAAATTTTCCGGCGACATTCCGGTTTCTTTAACCGAACTCGATCTCCTCAAAGAACTTCACCTGGAAAGCAACGAATTCTCTGGTCAGTTACCGAATTTAAAACAAGATATAAAATCATTCGACGTTTCGAATAACAAATTAGAAGGTCCGATTCCGGAAGGTCTTTCGAAATTCGGTGCAGTCTCGTTTGCCGGTAACGCAAATCTATGCGGAAAACCGTTGGAAAAGCCATGTGACGGTTCATTTTCATCATATTATTCGCTGCCGAGTCCCGAAACGGAAAACCGTTACGGTTCTGGTTGGGCGGTTAAAGTGATAGTAATTCTGTTTTTAGCAGTTATAGCGGCGATTATATTTCTATTAGTAAAATCGAAGCAACGAAGGCGCGAAGACGATGATTTCAGCGTTGTTAGCAGAGACAGCAATGTCGATGAAGTGATGCAAGTGCACGTGCCGATAACACGAGCTTCATCGGAGCGTGTGGGAAGGAGGAACGTCGGAGAATCGTCGAAGAGAGGAAGTGGAATGGGAGGTGCTAGGACTGGGATAGGCGATATTGTGATGGTGAATGATGAGAAGGGTTCGTTTGGTTTGCAGGATTTGATGAAAGCTGCTGCTGAGGTATTGGGGAATGGTGGGTTGGGATCTGCTTATAAAGCTGCTATGGCGAATGGGTTGAGTGTAGTTGTGAAGAGGATGAGGGAGATGAATAAAATTGGGAAAGATGTTTTTGATGCTGAGATGAGACAGTTTGGGAGGATTAGACATACTAATATTTTGACTCCTTTGGCTTATCATTATAGAAGAGAGGAGAAGCTTTTTGTTACTGAGTATAAGCCTAAAGGAAGCTTGTTATATGTCTTGCACGGTGATAGAGGAACATCGCATTCAGAGTTAACATGGCCAATCCGTTTGAAAATCGCTAAAGGAATTGCAAGAGGGTTAAGCTTCCTCTACACTGAATTTTCCACCTATGACCTACCCCATGGAAACCTCAAATCCTGCAATGTTCTACTAAATGATGATTATGAACCTCTATTAAGTGACTATGCTTTTCAACCACTAATCAACCCAAGTGTTGCAGTACAATCGATGTTTGCATACAAAACACCAGATTACATTCAAAACCAGAAGCTTTCGCAAAAGGCTGATGTTTATTGCCTCGGAATCATCATTCTTGAAATCATTACAGGAAAATTCCCTTCTCAGTATCATAGCAATGGTAAAGGTGGTACTGATGTTGTTCAATGGGTACTCACCGCGATTTCAGAGAGAAGAGAAGCTGAATTGATTGATCCCGAGTTACAAAACAATGCAAATTCAATGAATCAAATGTTGCAGCTTCTCCAAATCGGTGCTGCTTGCACCGAAAGCAACCCAGATCAAAGAGTACACATGAAGGAAGCTATTAGAAGGATAGAGGAGGTGCAACTCTAA 1887 0.4282 MATAVLLLLLLSLSSFSLSTAQAPPSETQSLLKLKQSFKNSDKILSSWIPNVSPCSGTWIGVVCFNNIITGLHLSDLSLSGTIDVDAISEIRGLRTLSFVNNSFTGPIPQFNKLGTIKSLLLTQNQFSGPIPQDFFSHLNSLKKIWFSGNKFSGDIPVSLTELDLLKELHLESNEFSGQLPNLKQDIKSFDVSNNKLEGPIPEGLSKFGAVSFAGNANLCGKPLEKPCDGSFSSYYSLPSPETENRYGSGWAVKVIVILFLAVIAAIIFLLVKSKQRRREDDDFSVVSRDSNVDEVMQVHVPITRASSERVGRRNVGESSKRGSGMGGARTGIGDIVMVNDEKGSFGLQDLMKAAAEVLGNGGLGSAYKAAMANGLSVVVKRMREMNKIGKDVFDAEMRQFGRIRHTNILTPLAYHYRREEKLFVTEYKPKGSLLYVLHGDRGTSHSELTWPIRLKIAKGIARGLSFLYTEFSTYDLPHGNLKSCNVLLNDDYEPLLSDYAFQPLINPSVAVQSMFAYKTPDYIQNQKLSQKADVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVLTAISERREAELIDPELQNNANSMNQMLQLLQIGAACTESNPDQRVHMKEAIRRIEEVQL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01271 628 Gene3D Ribonuclease Inhibitor 26 137 IPR032675 -
Car01g01271 628 Gene3D Phosphorylase Kinase; domain 1 330 428 - -
Car01g01271 628 ProSiteProfiles Protein kinase domain profile. 353 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01271 628 PANTHER LRR RECEPTOR-LIKE KINASE 5 628 - -
Car01g01271 628 SUPERFAMILY L domain-like 23 212 - -
Car01g01271 628 Gene3D Ribonuclease Inhibitor 138 229 IPR032675 -
Car01g01271 628 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Car01g01271 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 628 - -
Car01g01271 628 Gene3D Transferase(Phosphotransferase) domain 1 430 628 - -
Car01g01271 628 MobiDBLite consensus disorder prediction 308 327 - -
Car01g01271 628 CDD STKc_IRAK 359 625 - -
Car01g01271 628 Pfam Protein kinase domain 357 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01271 628 SUPERFAMILY Protein kinase-like (PK-like) 357 623 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01271 Car-Chr1 16794562 16797998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01271 3 628 Receptor kinase-like Gene Family AT3G42880 50.858 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car01g01271 Pkinase 6.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01271 - - gmx:100790660 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01271 01 16794562 16797998 Car01g01271 01 16794562 16797998 ECH
Car07g00383 07 3370628 3373258 Car01g01271 01 16794562 16797998 PCT