Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01257 ATGGCATCTGATTCAAACGCCACCAATATGCTCCAGGCCATTCGCTACAACCGCGGTTCTCTTCAGCTTCTCGATCAGACAAAACTCCCGTTAGAAAGCGTTTACTTGGAGATTCGGGATTCAAATGATGGCTGGAATGCTATACGGGATATGGTGGTCCGGGGAGCACCTGCTATTGCTATTGCAGCGGCACTCGCTCTGGCTGTGGAGGTGTCCAATTTAGATGATTTCAGTGGGTCTACTGATGACGCTGCCTACTTCCTACATAAGAAGCTGGAATATCTTGTAACTAGTCGGCCAACTGCGGTGAACTTATCAGACGCCGCAACAAAACTCAAAGAAATCATATCTATGGCTGCTGCTACGACTTCAGAGGCTAGGGGTGTTTTTCAGGCTTATGTAGAGGCTGCTGAAATAATGCTTGAGGATGATGTTGCATCGAACAAAGCAATTGGAATATATGGAGCTAGTTTTATTCAAAACCATACAGAGAAACATAAGCTTTCTGTTTTGACCCATTGCAACACTGGAAGTTTAGCAACTGCTGGATATGGTACTGCTCTCGGTGTAATCCGTGCACTTCACAGCGGAGGAGTTTTAGAAAGGGCTTATTGCACAGAAACACGTCCATTCAATCAAGGATCCAGACTTACTGCCTATGAATTGGTACATGACAAAATACCAGCAACTCTTATAGCAGATTCTGCTGCTGCCGCATTAATGCAAGCAGGACGTGTGGATGCTGTTGTTGTTGGTGCAGATCGAGTTGCATCAAATGGTGACACAGCCAACAAAATTGGAACCTATAGTGTTGCCTTATGTGCCAAGTTTCATAATGTGCCTTTTTATGTGGCTGCACCCTTGACTTCCATTGATCTATCACTTTCTTCTGGGAAACAAATTGTCATTGAGGAGAGATCTCCCAAGGAATTGTTGAACACACGTGGAGGACTCGGAGAGCAGGTTGCTGCCTCAGGAATATCTGTGTGGAATCCGGCTTTTGATGTTACACCTGCTAATCTAATATCCGGGATCATCACTGAGAAGGGTGTCATTACAAAGACATCTGCTGGTGATGCCTCCTTTGACATAAAAACTTTTGTACAGAAAACAAGCTAA 1119 0.4468 MASDSNATNMLQAIRYNRGSLQLLDQTKLPLESVYLEIRDSNDGWNAIRDMVVRGAPAIAIAAALALAVEVSNLDDFSGSTDDAAYFLHKKLEYLVTSRPTAVNLSDAATKLKEIISMAAATTSEARGVFQAYVEAAEIMLEDDVASNKAIGIYGASFIQNHTEKHKLSVLTHCNTGSLATAGYGTALGVIRALHSGGVLERAYCTETRPFNQGSRLTAYELVHDKIPATLIADSAAAALMQAGRVDAVVVGADRVASNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSIDLSLSSGKQIVIEERSPKELLNTRGGLGEQVAASGISVWNPAFDVTPANLISGIITEKGVITKTSAGDASFDIKTFVQKTS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01257 372 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 12 354 IPR005251 -
Car01g01257 372 Gene3D - 167 364 IPR042529 -
Car01g01257 372 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 9 368 - -
Car01g01257 372 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 39 354 IPR011559 GO:0044249
Car01g01257 372 Gene3D - 10 166 IPR027363 -
Car01g01257 372 SUPERFAMILY NagB/RpiA/CoA transferase-like 8 359 IPR037171 -
Car01g01257 372 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 11 363 IPR005251 -
Car01g01257 372 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 9 368 - -
Car01g01257 372 Pfam Initiation factor 2 subunit family 53 353 IPR000649 GO:0044237
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01257 50 372 Eukaryotic Initiation Factors Gene Family AT2G05830 75.000 1.01e-168 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01257 K08963 - gmx:100799311 568.926