Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01256 ATGGGTTCTGTTTCCACCTTTTTCTTCATTCTCCTTCCCCTCTTTTTATCATCCTCAATCAATGCATCCAAAAAAACTTACATAGTTCACATGAAGGACCACAATAAGCCTTCCGTGTACCAAACTCACCACGATTGGTACACCGCAAGTCTCCAATCACTTTCAATTAACACCGATTCTGAATCGtccgattcagattcagattcagattttgatccaCTTCTCTATTCTTACACAACCGCTTATAACGGTTTCGCCGTTACACTTAACGACGAACAAGTCCAATCACTAACCCGATCCGACTCCGTTTTGGGCGTTTACGAAGACACCGTTTATCAACTTCACACTACACGAACTCCACAGTTTCTTGGACTCGAAACTGAAACGGGTTTATGGGAAGGACATAGAACACAGGAGTTAGATCAAGCTTCACATGATGTTATCGTAGGGGTGCTTGACACTGGAGTGTGGCCTGAATCTCTGAGTTTTAACGACGCTGGTTTGCCTGTAATTCCCACGCGCTGGCGTGGCGCGTGTGAAGATACGCCAGATTTTAACGCTTCTCTTTGTAACAGAAAACTTATCGGCGCTAGAAGCTTCTCTAAAGGTTTTCACATGTCCAATGGTTACGGAAAAACAAGCAACGAGGAGCCAATTTCGCCTCGTGATAGAGATGGACATGGGACCCACACGGCGAGTACCGCCGCGGGATCGCATGTTGCGAACGCGAGTTTTCTCGGTTACGCTACTGGAACTGCGAGAGGCATGGCTCCTCAGGCGCGTGTTGCGGCTTACAAAGTTTGTTGGACTGATGGTTGTTTCGCTTCCGATATTCTCGCCGGAATGGATCGTGCTATTCAAGACGGCGTCGACGTGCTCTCTCTGTCACTCGGCGGTGAATCTGTTCCTTATTTTCGCGACACCGTCGCGATCGGAGCTTTTGCGGCGGTTGAGCGTGGAATCTTCGTTTCATGCTCCGCCGGGAACAGTGGTCCTGCTAGAGCTTCAATTGCCAACGTGGCGCCGTGGATTATGACGGTTGGAGCCGGGACGCTGGACCGGGACTTTCCGGCTTACGTAACGCTGGGGAACAAAAAGCGGCTTTCGGGAGTTTCTCTTTATAGTGGAAAGGGAATGGGAAGCGAACCGGTTGGTTTGGTTTATTTTAAAGGTTCGAACCATTCAGCGAATATTTGCATGGCCGGTTCACTTGACCCGGCTTTGGTTCGTGGGAAAGTGGTTATATGCGATAGAGGAATTAGCGCGCGTGTGGAGAAAGGTAAAGTTGTGAGAGATGCCGGTGGAATTGGGATGATACTAGCGAACACGGCAGAGAGTGGGGAAGAGTTAGTTGCGGATAGTCACCTGCTACCGGCTGTGGCGGTTGGGAATACCATTGGGGATGAGATTAGAGAATATGGATCTTCTGATCGTAATCCAACGGCGGTGCTTAGTTTTGGTGGAACTATTTTGAACGTTAGACCTTCACCTATTGTGGCAGCTTTTAGTTCGAGGGGGCCCAATATGATAACTAAAGAGATTTTGAAACCGGATGTTATTGGGCCTGGTGTGAACATTTTGGCAGGGTGGTCTGATGCTGTTGGGCCCTCTGGCCTGGCTGGAGACAATCGTAAAACACAGTTCAACATCATGTCAGGCACTTCAATGTCTTGTCCACACATAAGTGGGTTAGCTGCATTGTTGAAAGCAGCTCATCCAAATTGGAGTCCAAGTGCAATTAAATCAGCTCTTATGACAACAGCTTATACACACGACAATTCCAAGTCTCCACTTCGTGATGCTGCTGGTAAATCCTTTTCAACTCCATGGGCTCATGGTGCTGGCCATGTCAACCCACAAAAAGCGTTTTCACCAGGCCTTGTTTATGATGCCTCAACAAAAGATTACATTACCTTCTTGTGTTCCTTAAACTACAACCCTGAACAAATCCAACTCATTGTTAAGCGACCTGATGTCAATTGCACCAACAAATTCGCTAATCCCGGTCAATTGAATTACCCCTCTTTCTCGATTATGTTTTCCAGCAAGAGAGTTGTGAGATACACTCGTATCTTGACGAATGTTGGCGAAGCGGGTTCTGTTTATAATGTGGTGGTTGATGGGCCGTCTTGGGTCGACATAACGGTGAAGCCTTCAAGGCTTGTGTTTGAGAAAGTAGGGGATAGAAAAAGGTACACAGTTACCTTTGTGTCAAAGAAGGGTGTTGATACTTCTTCAGTTAGGAATGGATTTGGTAGCATTCTATGGAGCAATACACAGCACCAAGTTAGAAGCCCAATTGCTTTTGCTTGGACAGAGTTGTGA 2325 0.4654 MGSVSTFFFILLPLFLSSSINASKKTYIVHMKDHNKPSVYQTHHDWYTASLQSLSINTDSESSDSDSDSDFDPLLYSYTTAYNGFAVTLNDEQVQSLTRSDSVLGVYEDTVYQLHTTRTPQFLGLETETGLWEGHRTQELDQASHDVIVGVLDTGVWPESLSFNDAGLPVIPTRWRGACEDTPDFNASLCNRKLIGARSFSKGFHMSNGYGKTSNEEPISPRDRDGHGTHTASTAAGSHVANASFLGYATGTARGMAPQARVAAYKVCWTDGCFASDILAGMDRAIQDGVDVLSLSLGGESVPYFRDTVAIGAFAAVERGIFVSCSAGNSGPARASIANVAPWIMTVGAGTLDRDFPAYVTLGNKKRLSGVSLYSGKGMGSEPVGLVYFKGSNHSANICMAGSLDPALVRGKVVICDRGISARVEKGKVVRDAGGIGMILANTAESGEELVADSHLLPAVAVGNTIGDEIREYGSSDRNPTAVLSFGGTILNVRPSPIVAAFSSRGPNMITKEILKPDVIGPGVNILAGWSDAVGPSGLAGDNRKTQFNIMSGTSMSCPHISGLAALLKAAHPNWSPSAIKSALMTTAYTHDNSKSPLRDAAGKSFSTPWAHGAGHVNPQKAFSPGLVYDASTKDYITFLCSLNYNPEQIQLIVKRPDVNCTNKFANPGQLNYPSFSIMFSSKRVVRYTRILTNVGEAGSVYNVVVDGPSWVDITVKPSRLVFEKVGDRKRYTVTFVSKKGVDTSSVRNGFGSILWSNTQHQVRSPIAFAWTEL 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01256 774 Pfam Subtilase family 145 592 IPR000209 GO:0006508|GO:0008236
Car01g01256 774 Gene3D - 640 771 - -
Car01g01256 774 Gene3D Peptidase S8/S53 domain 146 636 IPR036852 GO:0004252|GO:0006508
Car01g01256 774 CDD Peptidases_S8_3 112 589 IPR034197 -
Car01g01256 774 ProSiteProfiles Serine proteases, subtilase domain profile. 128 623 - -
Car01g01256 774 Pfam Peptidase inhibitor I9 26 115 IPR010259 -
Car01g01256 774 Gene3D - 353 491 - -
Car01g01256 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 771 IPR045051 -
Car01g01256 774 Pfam PA domain 390 470 IPR003137 -
Car01g01256 774 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Car01g01256 774 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Car01g01256 774 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Car01g01256 774 PANTHER CUCUMISIN-RELATED 16 771 - -
Car01g01256 774 SUPERFAMILY Subtilisin-like 114 627 IPR036852 GO:0004252|GO:0006508
Car01g01256 774 CDD PA_subtilisin_like 359 482 - -
Car01g01256 774 MobiDBLite consensus disorder prediction 208 234 - -
Car01g01256 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 115 IPR037045 -
Car01g01256 774 Pfam Fibronectin type-III domain 670 768 IPR041469 -
Car01g01256 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Car01g01256 774 SUPERFAMILY Protease propeptides/inhibitors 25 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01256 Car-Chr1 15738614 15742422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01256 7 774 Subtilisin-like Serine Gene Family AT2G05920 65.540 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01256 - - gmx:100797543 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01256 01 15738614 15742422 Car01g01256 01 15738614 15742422 ECH
Car07g00376 07 3321739 3324469 Car01g01256 01 15738614 15742422 PCT