Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01253 ATGACAATGATGAAAATGATATTGAAAACAATTTTGCCATCAAGTTGTTTCAAAGGTGAGTATCCATCACCAAAGTCAAAGAAAGTGGTATCAACAAAACCAAGAAGTTCTTCAATATCATCTCATAGGATTCCTATAACGGAGTTGAGTAATCCAAACTCAACACTTTCAGAGGATCTATCTATTTCTCTAGCAGGAACAAATATTCATGCTTTTACAGTTGCTGAGCTTAAGATAATCACACAACAATTTTCTTCAAGTAATTTTCTTGGGGAAGGTGGGTTTGGTCCTGTTCATAAGGGGTTTATAGATGATAAACTAAGGTATGGTTTGAAGGCTCAACCGGTTGCTGTTAAGCTTTTGGATTTGGAAAGCAAACAAGGTCACAAAGAGTGGTTGACTGAAGTTGTTGTTCTGGGGCAATTGACTCATCCACACCTTGTGAAGCTAATAGGATACTGTTGTGAAGATGAACATAGGCTTTTGGTATATGAATATTTACCAAGAGGAAGTTTGGAAAATCAATTATTTAGAAGATTCTCAGCATCATTACCATGGTCAACAAGAATGAAAATAGCTGTTGGAGCTGCAAAAGGTTTAGCCTTTCTTCATGAAGCAGAGAAACCAGTTATTTTTAGAGATTTCAAAGCTTCAAACATCTTGTTAGACTCTGATTATAATCCAAAACTCTCTGACTTTGGGTTGGCAAAAGATGGCCCTGAAGGAGATGACACCCACGTTTCAACCAGAGTTATGGGTACTCAAGGTTATGCTGCCCCAGAATATGTCATGACAGGTCACTTGACAGCCAAGAGTGACGTGTACAGCTTTGGAGTAGTTTTATTGGAGTTACTAACAGGAAGAAAATCAGTGGACAAAAATCGTCCTCCAAGGGAACAAAACCTAGTAGATTGGGCTAGACCAATGTTAAATGATTCAAGAAAAATTAGCAAATTAATGGATCCAAAACTTGAAGGACAATATTCCGAAATGGGCACTAAAAAAGCAGCTTCATTGGCTTTTCAATGCCTTAGCCATAGACCAAAGAGTAGGCCCACAATGAGCAATGTTGTTAAGATTTTGGAACCTTTACAAGATTTTGATGATATTCCAATGGGACCTTTTGTTTACCATGCTCCAATTGATAACATTGAAGTGAATAAAGAAAAAGAAGTTAAGGAATATGAAACACCTAAGGAGAGGAATAGGGAAAATGGTCGCTATCATAGGAACGGTCATCGGCATCATCCACTTAAGTCTCCTAAATCGCCGAATCCTCAATTACAACTGCAATTACAGGCACGACAACGTTTGCAAAATGACAGACACCGAAATGGTAGAGGAAGCAGGTCGAATCCTCCTTCGCCGCATACAAAAGGCTAG 1383 0.3847 MTMMKMILKTILPSSCFKGEYPSPKSKKVVSTKPRSSSISSHRIPITELSNPNSTLSEDLSISLAGTNIHAFTVAELKIITQQFSSSNFLGEGGFGPVHKGFIDDKLRYGLKAQPVAVKLLDLESKQGHKEWLTEVVVLGQLTHPHLVKLIGYCCEDEHRLLVYEYLPRGSLENQLFRRFSASLPWSTRMKIAVGAAKGLAFLHEAEKPVIFRDFKASNILLDSDYNPKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAKSDVYSFGVVLLELLTGRKSVDKNRPPREQNLVDWARPMLNDSRKISKLMDPKLEGQYSEMGTKKAASLAFQCLSHRPKSRPTMSNVVKILEPLQDFDDIPMGPFVYHAPIDNIEVNKEKEVKEYETPKERNRENGRYHRNGHRHHPLKSPKSPNPQLQLQLQARQRLQNDRHRNGRGSRSNPPSPHTKG 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01253 460 MobiDBLite consensus disorder prediction 390 460 - -
Car01g01253 460 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 28 418 - -
Car01g01253 460 Gene3D Phosphorylase Kinase; domain 1 47 166 - -
Car01g01253 460 MobiDBLite consensus disorder prediction 390 407 - -
Car01g01253 460 CDD STKc_IRAK 90 364 - -
Car01g01253 460 Gene3D Transferase(Phosphotransferase) domain 1 167 370 - -
Car01g01253 460 PANTHER OS01G0588500 PROTEIN-RELATED 28 418 - -
Car01g01253 460 SUPERFAMILY Protein kinase-like (PK-like) 60 362 IPR011009 -
Car01g01253 460 Pfam Protein tyrosine and serine/threonine kinase 88 361 IPR001245 GO:0004672|GO:0006468
Car01g01253 460 ProSiteProfiles Protein kinase domain profile. 84 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01253 460 MobiDBLite consensus disorder prediction 422 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01253 Car-Chr1 15594614 15599018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01253 51 361 Glycoside Hydrolase AT3G07070 50.318 1.29e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car01g01253 PK_Tyr_Ser-Thr 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01253 - - cam:101488466 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03021 07 57042093 57044862 Car01g01253 01 15594614 15599018 ECH
Car07g00375 07 3292554 3294629 Car01g01253 01 15594614 15599018 ECH
Car01g01253 01 15594614 15599018 Car07g03021 07 57042093 57044862 ECH
Car01g01253 01 15594614 15599018 Car01g01253 01 15594614 15599018 ECH
Car01g01253 01 15594614 15599018 Car05g02877 05 73726537 73728904 ECH
Car01g01253 01 15594614 15599018 Car04g03263 04 61073437 61076764 ECH
Car07g00375 07 3292554 3294629 Car01g01253 01 15594614 15599018 PCT