Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01232 ATGGAAGAAGAAAAAAACATGAAAGACAACAAAACGACAAAAAACGAGGTTGTTCTTCGAATTTCAAACAACGAACAAAGGAGAGATTTTTGTGGTACCCCAGTTGTTGAAACCACTTCTTACTCTGCTCCTCAGCTTATTTCCAAGATGGGTTCATCTCATTCTCCAAAAGGTTTTATAGATTCACACGTAGAACTCGCGGAGCTTGAGAATCTCAGAAGAAGTAGTAGCCAAGTTTCGACTGAGTTTGCTACAACTACTACAAACACTTTCTTGGGTAGGTCTGAATTTTCAAAGCCAAAATCCAGATTTGTTGAACCACCATTTTCTAAAGATTCAAGCTATGTTGAAGAAAATGCTAAAATGAAGAATGTTGAAGTTCATGTTCCTGATGGAAGTGTTGTTACTCCAAGGACCCCTTTGATTGGTACTCCAAGAGTTGGAGAAgatgatgaagaagatgatgatgatgatgatgatgatgaAGTGTATAAAACTGCAGATATTGAAGTGAGTAAGAGATTTGGTAAGAAAAGGAAACTAATGAGATTGATTGAGTTGTTTTTCTTTGTTTGCATTTTGGGGTTTTTGATTGCAAGCTTAATGGTTCATAGATTGCAACATAAGGAAATTTGGGGTTTGGTACTTTGGAAATGGTGTGTGCTTGCATTGGTTATTATCTCTGGTAGATTAGTCACTAGTTGGTTAATCAATGTTTTGGTTTTCTTAATTGAAAGGAACTTTTTGTTTAAGAAGAAAGTTTTGTACTTTGTTTATGGTGTTAGGAAGAGTGTTCAAGCTTTTATTTGGTTAAGTTTGGTACTTCTCGCTTGGAGTTTAGTTTTCAACCATGGAATCAAGAGAGCAAGAAAAGTTGTTAGGATTATTGATTACATCACAAGAGCACTTGCATCTTGTGTTATTGCATCAGCTATATGGTTAGGGAAAACATTGTTGATAAAGCTTTTGTCTTCATATTTTCAATCCACTAGATTTTTCGATAGGGTTCAAGAATCGATTTTTCATCAGTATATTCTTAGGACTCTTTCAGGTCCTCCTTTGATGGAGATGGCTGAAACGGTAGGCAAGAGTTCTCCGAGTAGTCGTCGGCTAAGTTTTAAGACGATGGTTAGAGAAGATGAGAAGAAAGGAAAGAAAGAGCAAGTCATTGATGTTGATAAGCTTAAGAAAATGAAACAAGAGAAAGTTTCTGCTTGGACTATGAAAGGGTTGATTACTGTGATAAGGAGTTCTGGATTGTCGACCATTAGTTATACGCCGGAGAGTATCTATGAAGAAGAGATTGATCAGAGAGATAATGAAATTACTAGTGAGTGGGAGGCGAAGGCGGCTGCTTATCGGATTTTCAGAAATGTTGCTAAGCCGGGAAGCAAGTACATTGAGAAGGAAGACCTCTTGCGCTTCATGAGGATTGAAGAAGTGGAAAATTTGCTTCCACTATTTGAAGGAGCAGTTGAGACTGGAAGAATTAAGAGGAAGTCTTTGAAGAATTGGCTGTTGAAAGTCTACCTAGAACGTCGATCGCTTGTACATTCACTAAACGATGCTAAAACAGCTGTTGATGAATTGAATAACCTTGCTTCTGGAATTGTCCTTGTTGTAGCCATTATTGTGTTGTTGCTTGTAATGGGATTCTTAACAACACAAGTTCTTGTTTTTATTTCATCACAACTTTTACTTGTGGTGTTTGTGTTTGGCAACACAGCTAAGACTATTTTTGAAGCCATTATATTTGTTTTCGTGATGCATCCGTTCGACGTCGGCGATCGTTGTGTCATTGATGGTGTTCAGATGACTGTAGAAGAGATGAACATACTAACTACAATCTTTTTGAGATATGACAATGAAAAGATATTCTATCCAAATTCAGTTCTTGCAACCAAGCCAATCAGTAACTTCTACCGGAGTCCGGAAATGAGTGATTTGGTTGAATTTGCTGTCGATGTTTCTACTTCAATAGAAAGTATTGGAGCCTTAAAGACTAGATTAAAAGCATACTTGGAGAGTAGGCCTCAACATTGGCGTCCAAACCATAACGTAATTGTTAAGGATATTGAGAATGTAAACAAGATGAAAATGGCTCTAAATGTTACTCACACCATAAACTTTCAGAATTTTAGTGATAAGAACAGCAGAAGATCTGAATTAGTCTTGGAGTTAAAGAAAATTCTTGAAGATCTTGATATTAAATACCACTTGCTGCCACAAGAAGTTCATCTTAGTTATGTAAAGTCACATGACCATATGGCATAA 2274 0.3624 MEEEKNMKDNKTTKNEVVLRISNNEQRRDFCGTPVVETTSYSAPQLISKMGSSHSPKGFIDSHVELAELENLRRSSSQVSTEFATTTTNTFLGRSEFSKPKSRFVEPPFSKDSSYVEENAKMKNVEVHVPDGSVVTPRTPLIGTPRVGEDDEEDDDDDDDDEVYKTADIEVSKRFGKKRKLMRLIELFFFVCILGFLIASLMVHRLQHKEIWGLVLWKWCVLALVIISGRLVTSWLINVLVFLIERNFLFKKKVLYFVYGVRKSVQAFIWLSLVLLAWSLVFNHGIKRARKVVRIIDYITRALASCVIASAIWLGKTLLIKLLSSYFQSTRFFDRVQESIFHQYILRTLSGPPLMEMAETVGKSSPSSRRLSFKTMVREDEKKGKKEQVIDVDKLKKMKQEKVSAWTMKGLITVIRSSGLSTISYTPESIYEEEIDQRDNEITSEWEAKAAAYRIFRNVAKPGSKYIEKEDLLRFMRIEEVENLLPLFEGAVETGRIKRKSLKNWLLKVYLERRSLVHSLNDAKTAVDELNNLASGIVLVVAIIVLLLVMGFLTTQVLVFISSQLLLVVFVFGNTAKTIFEAIIFVFVMHPFDVGDRCVIDGVQMTVEEMNILTTIFLRYDNEKIFYPNSVLATKPISNFYRSPEMSDLVEFAVDVSTSIESIGALKTRLKAYLESRPQHWRPNHNVIVKDIENVNKMKMALNVTHTINFQNFSDKNSRRSELVLELKKILEDLDIKYHLLPQEVHLSYVKSHDHMA 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01232 757 MobiDBLite consensus disorder prediction 1 15 - -
Car01g01232 757 MobiDBLite consensus disorder prediction 1 21 - -
Car01g01232 757 SUPERFAMILY Sm-like ribonucleoproteins 581 640 IPR010920 -
Car01g01232 757 PIRSF Memb_At2g17000 1 757 IPR016688 -
Car01g01232 757 MobiDBLite consensus disorder prediction 139 161 - -
Car01g01232 757 Gene3D - 591 640 IPR023408 -
Car01g01232 757 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 10 751 - -
Car01g01232 757 Pfam Mechanosensitive ion channel 534 737 IPR006685 GO:0016020|GO:0055085
Car01g01232 757 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 10 751 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01232 Car-Chr1 15201969 15205798 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01232 92 748 Mechanosensitive Ion Channel Family AT5G12080 52.504 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01232 K22048 - gmx:100777332 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01232 01 15201969 15205798 Car01g01232 01 15201969 15205798 ECH