Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01229 ATGCTTACATGCATAGCACGTCCAAAGAAACTCGGCGACGACTCACTGAGTCGCGGAGACGAGTCAGAATCGAACAACAATGCAAAGAACAACAACGGAATCAAATCGCTGACGTGTCAGATTAAAGACATGGCATTGAAAGCCTCTGGCGCGTACAAAAACTGCAATCCGTGCGCTCCGGCGAGTCGACTCAGAAACGGAGGTTCCGAATCGGAAACTGACTCGGAGCGGTTTCGGAGGACGAGGACATGGGGGAAAGAGATGGAAGCGAGGTTGAAAGGGATCTCAAGCGGAGAAGGAACGCCAAGTTCGTCTTCTTCTTCGTTCGGCGGTGGTAGTGGTCGAAGAGTGGTGGTGCTTgaggaggaggaggcgaaggagtgggtggcgcaggtggagCCTGGCGTTTTGATTACTTTTGTGTCGCTTCCGCGTGGCGGGAATGATCTAAAGCGGATACGGTTCAGTCGTGATATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGCCAAGCCTTCCCGCTTCCCACTCCAGCAAGATCTGAAGATGAGAGTTCAAAGCGTGAATCAGTAGCAGACAGCCCTGTGACACCACCACTAACCAAAGAACAACTATCACGCAATTTATACCGACCAACAGGAAATGGAATGGGAATGGGATACTCATCCTCAGATTCCTTTGATCAACACTCAATGCAGTCCAAACATTATCAGTATGACTTGAGTGGTATGAACTCAACACCAAAAGTGTCAACCATTAGTGCTGCCAAGACAGATATTTCATCAATGGGTGCTTCTATAAGAAGTAGTTCATCTAGAGAAGCTGATCGCTCTGGCGATTTATCAATCAGCAATGCTAGTGATCCTGATAGTGAATGGGTTGAGGAGGATGAACCTGGTGTTTACATTACCATTAGATCTTTGCCAGGTGGCAAAAGGGAAATCAGACGTGTCAGGTTCAGTCGAGAAAAATTTGGTGAGATGCATGCTAGACTATGGTGGGAAGAGAACCGTGCCAGAGTACATGAACAATACTTGTGA 1092 0.4515 MLTCIARPKKLGDDSLSRGDESESNNNAKNNNGIKSLTCQIKDMALKASGAYKNCNPCAPASRLRNGGSESETDSERFRRTRTWGKEMEARLKGISSGEGTPSSSSSSFGGGSGRRVVVLEEEEAKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDIFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPARSEDESSKRESVADSPVTPPLTKEQLSRNLYRPTGNGMGMGYSSSDSFDQHSMQSKHYQYDLSGMNSTPKVSTISAAKTDISSMGASIRSSSSREADRSGDLSISNASDPDSEWVEEDEPGVYITIRSLPGGKREIRRVRFSREKFGEMHARLWWEENRARVHEQYL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01229 363 MobiDBLite consensus disorder prediction 279 306 - -
Car01g01229 363 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 363 - -
Car01g01229 363 MobiDBLite consensus disorder prediction 59 79 - -
Car01g01229 363 MobiDBLite consensus disorder prediction 92 113 - -
Car01g01229 363 Pfam Transcription factor regulating root and shoot growth via Pin3 308 362 IPR013591 -
Car01g01229 363 Pfam Transcription factor regulating root and shoot growth via Pin3 126 180 IPR013591 -
Car01g01229 363 MobiDBLite consensus disorder prediction 97 112 - -
Car01g01229 363 ProSiteProfiles BRX domain profile. 308 363 IPR013591 -
Car01g01229 363 MobiDBLite consensus disorder prediction 279 312 - -
Car01g01229 363 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 363 IPR044532 -
Car01g01229 363 MobiDBLite consensus disorder prediction 191 246 - -
Car01g01229 363 ProSiteProfiles BRX domain profile. 126 181 IPR013591 -
Car01g01229 363 MobiDBLite consensus disorder prediction 214 246 - -
Car01g01229 363 Pfam Transcription factor BRX N-terminal domain 21 58 IPR027988 -
Car01g01229 363 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01229 Car-Chr1 15156146 15164822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01229 1 363 Major Intrinsic Protein MIP AT1G31880 43.005 1.99e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01229 - - rcu:8272507 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01229 01 15156146 15164822 Car01g01229 01 15156146 15164822 ECH