Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01219 ATGGAGGAAATAGCTTCGACGGTTGCAGTGCCATTTACACTTGGGAATTTAATATTAAAAGAGTCAGCAGTGACAACACACATGGAAATAACTGGTCTAAACCTAATGGCAAATACATCAACAGTTTTAATATTAATAAATCCTTCTTCTATTAAGGGTTGTCTATCCTTCTCTGTTGGAAGTGAAGACGACACCTATATTAGTCCACAACAACATCATTTATCAGTGTCATTAGAGGTTAAGGAGAATCAAGTTGGAGCTGAACTTGTCTCAGAAATGGTTCTTGAAGGTGACAGTGTTGGAAGAAATGATGAAGAATTCAAGATAGCTAAGGATTTTCAGTATGCTTCTAGTAATAACAAAAGTAGTCCTTTTAGGGAGGAATCTACAATTTCTAGGACTAATTTTTCTGAAGTGAACACACCAAATGTTATTGTGGTTGATGATAACATTGGTGATAGGTTGAGTTTGAATGAGGCGGTGAAGAACAATGCTTCTGTTGTGATGAAACATGAGAGTGAAGATGAAAGTAAATCGGACGGTCATAATTCAAAACCATTTGATGCAGTTCATGAGATGCTAGAGAAGCAAATATGCATAACAAGTTGCCATAATAATGCTTTGGAATTGAGCAATACTCCTCGTTGGGGTTTCTCATCAATTTGCGGAAGGAGACAAGAGATGGAAGATGCTATTGTTATTAAGCCTCACCTTTTTCAAGTTCCTTCAACGATGCTAATGGATGATGACCATGTGAATGAAAACACAAAAACCTCACTAGCACACTTTTTTGGAGTCTATGATGGACATGGAGGCAGTGAGGTTTCCAATTACTGCCAGAAACGTCTTCATTCAGTTCTGACTGAGGAGATAAAAGCTGCAGAATCAAGTTTGTCTGAAGAGAATGGACAATACGACTGGCAGGACCAATGGAAGAAAGTACTCACCAATTGCTTTCAAAAAATAGATGATGAGATTGAAGGAGTTCATGCATCTGAGTCAAGTACCGAAGAAACTCTTGCTCCTGAGGCTGTTGGATCCACTGCACTAGTTGCAGTTTTAACTCAAACGCACATAATAATTGCGAATTGCGGCGATTCAAGAGCAGTCTTGTGTCGCGGAAAAGAAGCGCTGTCTTTATCTACTGATCATAAACCAAATAGAGACGATGAGTGGGAAAGGATAGAAGCTTCGGGAGGAAAGGTCATACAATGGAACGGGTACCGAGTTCTTGGAGTTTTGGCAGTGTCAAGGTCCATAGGTGATAGATACTTGAAACCATGGATAATTCCGGATCCTGAAGTCAATTGTATCCTCCGAGAGAAAAATGACGAGTGCCTTATTCTAGCCAGTGATGGTTTATGGGATGTGCTAACAAACGAAGAAGCCTGCGATATTGCTCGAAAGCGAATCCTTATTTGGCATAAGAAGAATGGAAGCAATGTATCAACAGGACAAAGCGATGGAGTCGATCCCGCAGCTCAGTATGCTGCTGAGTATCTATCAAAACTTGCCCTTCAAAGGGGAAGCAAAGATAATATCTCAGTTATTGTTATAGACTTGAAGGCTCAAAGACAGTTCAAGAGAAAAGCTTAA 1596 0.3979 MEEIASTVAVPFTLGNLILKESAVTTHMEITGLNLMANTSTVLILINPSSIKGCLSFSVGSEDDTYISPQQHHLSVSLEVKENQVGAELVSEMVLEGDSVGRNDEEFKIAKDFQYASSNNKSSPFREESTISRTNFSEVNTPNVIVVDDNIGDRLSLNEAVKNNASVVMKHESEDESKSDGHNSKPFDAVHEMLEKQICITSCHNNALELSNTPRWGFSSICGRRQEMEDAIVIKPHLFQVPSTMLMDDDHVNENTKTSLAHFFGVYDGHGGSEVSNYCQKRLHSVLTEEIKAAESSLSEENGQYDWQDQWKKVLTNCFQKIDDEIEGVHASESSTEETLAPEAVGSTALVAVLTQTHIIIANCGDSRAVLCRGKEALSLSTDHKPNRDDEWERIEASGGKVIQWNGYRVLGVLAVSRSIGDRYLKPWIIPDPEVNCILREKNDECLILASDGLWDVLTNEEACDIARKRILIWHKKNGSNVSTGQSDGVDPAAQYAAEYLSKLALQRGSKDNISVIVIDLKAQRQFKRKA 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01219 531 SMART PP2C_4 205 519 IPR001932 -
Car01g01219 531 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 116 530 - -
Car01g01219 531 PANTHER ALPHABET, ISOFORM E-RELATED 116 530 - -
Car01g01219 531 SUPERFAMILY PP2C-like 211 522 IPR036457 -
Car01g01219 531 ProSiteProfiles PPM-type phosphatase domain profile. 215 521 IPR001932 -
Car01g01219 531 ProSitePatterns PPM-type phosphatase domain signature. 263 271 IPR000222 GO:0043169
Car01g01219 531 Pfam Protein phosphatase 2C 217 514 IPR001932 -
Car01g01219 531 Gene3D - 203 531 IPR036457 -
Car01g01219 531 CDD PP2Cc 215 521 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01219 Car-Chr1 14989072 14992852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01219 1 531 PP2C-type Phosphatase Gene Family AT1G17550 41.971 1.04e-134 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01219 K14497 - gmx:100812974 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01219 01 14989072 14992852 Car01g01219 01 14989072 14992852 ECH
Car07g00347 07 3094926 3097314 Car01g01219 01 14989072 14992852 PCT