Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01214 ATGGAGAATCACACGGTGAAGGTGGAGATCATAGATACAGAAGAAGATGAGGTGGGTCCCATGGCTGATACTGGTGGTGAAGATCAAGAAGATGAGGCTGTTTCAAGTTTGACAATGGAAAGGGTAGCTGCAGCTAAGAAATTCATTGAGAGTCATTATAGGTCTCAAATGAAACACATTGAAGAACGCAAGGAAAGGCGTTCAGAGCTACAAAAGAAGTTAGAATCTTCTCATGTACCTGAAGAGGAACAGATCAACCTATTGAAGGATTTAGAGAGCAAGGAGACTGAGTATATGCGGTTAAAAAGACATAAAATATGTGTTGATGATTTTGACCTTCTTACCATTATTGGCAGGGGAGCCTTTGGGGAGGTGAGACTCTGTCGGGAGAAGAAATCAGGTAACATATATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGAGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATATACTTGCAGAAGTTGCCAATGACTTCATTGTGAAACTTTATTACTCTTTTCAAGACACTGAATTCTTATATCTTATAATGGAATATTTACCGGGCGGTGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACAGAAAGTGTGGCTAGATTTTACATTGCACAGACCGTTTTGGCCGTAGAGTCTATTCATAAACACAATTACATTCATCGGGATATAAAACCTGACAACCTTCTATTGGACATAAACGGTCACATGAAGCTGTCGGATTTCGGTCTCTGCAAGCCACTTGACTGCTCAAATCTATCATCTATAAATGAAAATGAAATATTGGACGATGAAAACTTGAATGAGACGACGGACGTAGATAATAACAAAAATGGTAGGCGTTGGAAAAATCCTCTCGAACAACTTCAACATTGGCAAATGAATAGAAGGAAGTTGGCATTTTCCACGGTCGGAACTCCAGACTATATTGCTCCGGAAGTGTTACTGAAAAAGGGTTATGGTGTCGAGTGCGACTGGTGGTCTCTTGGCGCTATAATGTATGAGATGCTTGTCGGCTATCCTCCATTTTACTCTGATGATCCTGTAACAACATGCAGAAAGATTGTGCACTGGAAAAATCACTTAAAATTTCCGGACGAGGCGAGATTGACACCCGAAGCAAAAGATCTGATATGCAGATTGCTTTGTGGTGTTCCACATAGGCTCGGTACGAGAGGAGCAATTGAAATTAAAGCTCATCCTTGGTTTAGAGATGTTGTATGGGACAATCTCTATGAAACAGAGGCAGCATTTAAACCACGAGTCATTGGGGAGCTTGACACTCAAAATTTTATGAAATTTGATGAGGTAGAACAACCAAAGCCAATTCGAGCTGGATCCGGACCTATCAGAAAGAAGCTCTTAACTCCTCAAGATCTCAGTTTTGTTGGTTATACATATAAGAATTTTGCCGCTGTCAAGGGGAAGCGCCACTCTAAAGATAAGGGAAGCTTGTTGCCGCAGTCATCGATCGAATCCACACACAGTGATTCTGGAATAAACTATTCCACCTGA 1548 0.4089 MENHTVKVEIIDTEEDEVGPMADTGGEDQEDEAVSSLTMERVAAAKKFIESHYRSQMKHIEERKERRSELQKKLESSHVPEEEQINLLKDLESKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNILAEVANDFIVKLYYSFQDTEFLYLIMEYLPGGDIMTLLMREETLTESVARFYIAQTVLAVESIHKHNYIHRDIKPDNLLLDINGHMKLSDFGLCKPLDCSNLSSINENEILDDENLNETTDVDNNKNGRRWKNPLEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEARLTPEAKDLICRLLCGVPHRLGTRGAIEIKAHPWFRDVVWDNLYETEAAFKPRVIGELDTQNFMKFDEVEQPKPIRAGSGPIRKKLLTPQDLSFVGYTYKNFAAVKGKRHSKDKGSLLPQSSIESTHSDSGINYST 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01214 515 Gene3D Transferase(Phosphotransferase) domain 1 195 260 - -
Car01g01214 515 Gene3D Transferase(Phosphotransferase) domain 1 309 432 - -
Car01g01214 515 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 21 495 - -
Car01g01214 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Car01g01214 515 MobiDBLite consensus disorder prediction 495 515 - -
Car01g01214 515 MobiDBLite consensus disorder prediction 15 30 - -
Car01g01214 515 MobiDBLite consensus disorder prediction 1 35 - -
Car01g01214 515 CDD STKc_NDR_like 109 479 - -
Car01g01214 515 MobiDBLite consensus disorder prediction 491 515 - -
Car01g01214 515 ProSiteProfiles Protein kinase domain profile. 111 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01214 515 Gene3D Phosphorylase Kinase; domain 1 433 443 - -
Car01g01214 515 Gene3D Phosphorylase Kinase; domain 1 109 194 - -
Car01g01214 515 SMART serkin_6 111 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01214 515 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Car01g01214 515 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 495 - -
Car01g01214 515 Pfam Protein kinase domain 113 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01214 515 Pfam Protein kinase domain 306 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01214 515 ProSiteProfiles AGC-kinase C-terminal domain profile. 415 488 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car01g01214 515 SMART pkinase_C_6 415 480 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car01g01214 515 SUPERFAMILY Protein kinase-like (PK-like) 93 456 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01214 Car-Chr1 14926522 14931339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01214 12 498 AGC Kinase Gene Family AT2G19400 74.044 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Car01g01214 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01214 K08790 - gmx:100811359 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01214 01 14926522 14931339 Car01g01214 01 14926522 14931339 ECH