Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01187 ATGGGGATGGTTTTGGCAATGATTTTGTTGCTTGTCAAGTTTTGTGTTGTTGGATTTGTTGTGGCAGCTCAAGGATCTGAAGGATCTGTTATATCCCCATCTCCAGCATTCCTTCCTGTTGTTCATCCTGAAGGAGAAGCACCTGGTCCTATCCATCATGGACAGTCATGGGGAAGCATTGCATCAAGCCCTTCAGATCCAGATGGGTCTGTCATATTGCCATCTCCAGCTACATTACCTATGGATTCTTCCCCTATTGGAGCACCTAGTCTTTTACACCCAAATGGATCTTTCTTGCAACCTCCAGCTGCATTACCACCTCCAACTCCTCAGAAGATTAAAGGAATTGAATCATCGATATCACCTAGTCCTAGTCCAAGCACTAAATCCTTATTGCCACCATATACAGCTCTTCATGCACCATCAATTTCTGAAAGGAATGTGCCACCATCCATACAACCAATTCCGCCTCGAATGGAAACACCTACTGTTAGGCCTCCTGTATCCACACCAACTGCTCCAGCTCCTGGGGCAATACCTTCTGGAAATTTGCCAAGAACTTCACCTATAAGCCAACCAATTGAACATGGAAGTTTGCCTCCTAATGTTGATAACAGAAATGAAAGTAAGAGTCACAAACTAGAGCCAGTTTCACCAGGATCTTTCTTGCAACCTCCAGTTGCATTACCACCTCTTACATCCGCTCCAATTCCTCAGAAGATCAAAGGAAATGAATCATCAATATCACCTCCTAGTCCTAGTCCAAGCACTATATCCTTATCGCCGCCATATAAGGCTGTTCCAGTACCACCAACTGCTGAAAGGAATTTGCAACCAACCATGCAACCAATTCCACCTCAAAGGAAAGCACCTATTGTTAGGCCTCCTGAATCCACACCAATCGCTCCAGGATCTTTCTTGCAACCTCCAGTTACATTACCACCTCTTACATCAGCTCCAATTCCTCAGAAGATCAAAGGTAATGAATCATCGATATCACCTCCTAGTCCTAGCACTATATCCTTATCGCCACCATATAAGGATGTTCCAGTACCACCAACTGCTGAATGGAATTTGCCACCAACCATGCAACCAATTCCACCTCAAAGGAAAGCACCTATTGTTAGGCCTCCTGAATCCACACCAATCGCTCCAGTTCCTATTGCAATACCTTCTGGAAATTTTTCAAGAACTTCACCTATAAGCCAACCAATTGAACATGGAAGTTTGCCTCCTAACGTTGATAAGAGGAATGAAACTAAGAGTCACAACCTAGAACCAGTTTCACCAGCCCCGGTTACAACACCTTCTATCAATGTGCCCAAAATTTCACCAATAAGCCACTCAAATGATAATGGAAGTTTGCCTCCCAATGCTCATAGAGAAGGTACAACTACAAATAAAGGTCAACCCCCAGAGTCAATCTCACCAGCCCCTGTATTAAATTTGCCGAAATATTCTCCCGTGAATCAGCCAACTAAACCTGGAAGTTCGCCTCCAACTGTCCATAGAAGGAACTCTAGTATCAGTCACACATTGGTGCCAGCTTCACAAGCCCCGGTTGCAGAACCTCCTGTAAATTTTCCAAAAATTTCACCAGTCAGCCAACCTATTCAACATGGAAGTTTTCCACCTAATGTTCATAATAGAACTTCACATAAGCAACACACTCACACGCCAGAGCCAGTAATGCCATCACCAGTTACATCACCAACAAGTACATTTCCCGTAGATCCACCATTGGTCCACCCAGTCATACAAGCAGCACCTCCATCTGAATTACCAGCCCCTGTCATCTCTCCCTCATTAACACCTTCCAGAAGCTTCAATGGGGAAAATGGCGGACAACCTGTTTCTGCACCTTTGTACAAAACACCAAAGTCACCACCAGCTATAGTTCATTCCCCTGCTCAAGCTCCTTCTGAACATAAATCAAGGCCATTGCATCATGCTCCGGAGCCATTGATCTCACCTCCTAAATCTCCTATCAACAAAGAAGATCATTCTCCTGCATCTTTGCATTCAAGGAACACGATCACCAGCCCAGCTCCTGCATCATCATATTTCGTTTCTCCTCCCAGTTCCAAACACCAAGATCAACCAATTCCTCCCTCATTTCTTCCATCAAGTGGACGTAGACATTATGCTCCACCACCGATGAACACAGGTTCTGCAGAATCTCCATTTACCTTCCCTATGCAATCACCTGTGAGCCAAGATTCACCTGCTCCTTCTCCATCATTCAAAATATCCCCTCACTCAACCCAAATTCCATTTCATCCTCCTCAAGTATCTCCTTCTCGCCCTTCTTCGAAGAGCCCTAAGAAGCCAATCTTGCCTCAAGTTCAAGCCTTGCCGCCTCCACCTCCCAATGAAGATTGTTTATCAACTATATGCTCAGAGCCTTATACAAACTCTCCACCCGGAGTGCCCTGCATGTGTGTCTGGCCCATGAGAGTCGGCCTTCGCCTCGGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCTGAAATAGCCACGGGGGTTTTCATGAAACAAAGTCAAGTTCGCATTATGGGGGCAAACACAGCAACTGAGCAGCCAGATAAAACCGACACCCTCATTGATTTGGTACCACTTGGGGAAGAATTCGACAACACTACAGCCTTTTTAACTTCTGAGAGATTTTGGCATAAACAAGTTGTTATAAAAGCTTCTTACTTTGGTGATTATGAAGTGTTATATGTGAGCTATCCAGGTTTACCTCCATCTCCACCATTACCACCTTCAAGCATTAACATGATAGACGGTGGCCCATATTTAAATAATGGCAATAATGGTAGGACAATAAAGCCTCTTGGGGTTGACATACAGAAGAGGCAGCATAAAAGTGGACTTAGCAAGGGCATTATAGCTATTATTTCTCTTTCAGCTTTTCTAGCAGTTATTTTATGCTCTGCTGCTGTTTTGGCCGTGTTCAAGTTCAGAGATCATGTGCCTGAGCCTCAACCAACAACATCAACCCCACGGGGTTTTCCGCCATCTTCTACCAAAGCAACAGGTACTGCTGGGCCATCAGTTGCTTCAGCTTCAACATCATTTCGATCTAGCATTGCTGCTTACGCAGGATCTGCTAAGACTTTCAGTATGAATGAAATAGTGAAAGCCACTGATAATTTTCACCCTTCCAGAATACTTGGTGAAGGAGGTTTTGGGCTTGTTTATAGTGGTAACCTTGAAGATGGGTCAAAAGTAGCATTCAAAGTTCTAAAGAGGGAGGATCATCATGGTGATCGTGAATTTTTATCGGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAACTTGGTAAAGTTGATTGGTATATGTACAGAACTCAGCTTCCGCTGTCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGTTGACAGGGAAATTAGTCCACTTGATTGGAGTGCTCGGATAAAGATAGCACTTGGCGCTGCTCGTGGTCTCGCTTATCTGCATGAAGATTCAAGCCCACATGTCATACATAGGGACTTCAAATCTAGCAATATTTTGCTGGAAAATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCTCGAACAGCGGCTGATGAGGATAACAGGCACATATCTACACGGGTCATGGGAACTTTCGGTTATGTGGCTCCTGAGTACGCAATGACTGGGCATCTTCTCGTGAAGAGTGATGTATACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTGGACATGTCACAACCGCCTGGTCAAGAGAACCTTGTTGCATGGGCTCGTCCACTCCTCACAAGTAGAGAAGGACTGGAAGCGATAATCGATCCATCGCTAGGAGCTAATGTGCCTTTTGATAGTGTAGCTAAAGTTGCAGCCATCGCTTCAATGTGTGTACAACCGGAGGTTTCGGATCGTCCTTTCATGGGCGAGGTTGTTCAGGCTTTGAAACTTGTGTGTAATGAATGTGATGAAGCAAAAGAAGCAGGTTCAGGAAGTTCTAGCCGGGATGACTTATCATCTGATTTCAGAAGTGCTTCTGAACAACTACCAGATAGTTTCCGAGGCCATCATTTCTCAGCTACTAACTATGATTTCGGAGTTGATATTGAAAATGGGTTGTCGGCATCAGAATTATTCAGTTCATCAGCAAGAATTGGAAGGCAAGTATCTGGATCATTTAGAAGACATTCGTATTCAGGTCCTCTGAGAACCGAACGAAGCAAGCGGTTATGGCAGATAATTCGAAAGCTTTCTGGCGGTAGTGTCAGCGAACATGGAATTATGTTCAAGTAA 4338 0.4431 MGMVLAMILLLVKFCVVGFVVAAQGSEGSVISPSPAFLPVVHPEGEAPGPIHHGQSWGSIASSPSDPDGSVILPSPATLPMDSSPIGAPSLLHPNGSFLQPPAALPPPTPQKIKGIESSISPSPSPSTKSLLPPYTALHAPSISERNVPPSIQPIPPRMETPTVRPPVSTPTAPAPGAIPSGNLPRTSPISQPIEHGSLPPNVDNRNESKSHKLEPVSPGSFLQPPVALPPLTSAPIPQKIKGNESSISPPSPSPSTISLSPPYKAVPVPPTAERNLQPTMQPIPPQRKAPIVRPPESTPIAPGSFLQPPVTLPPLTSAPIPQKIKGNESSISPPSPSTISLSPPYKDVPVPPTAEWNLPPTMQPIPPQRKAPIVRPPESTPIAPVPIAIPSGNFSRTSPISQPIEHGSLPPNVDKRNETKSHNLEPVSPAPVTTPSINVPKISPISHSNDNGSLPPNAHREGTTTNKGQPPESISPAPVLNLPKYSPVNQPTKPGSSPPTVHRRNSSISHTLVPASQAPVAEPPVNFPKISPVSQPIQHGSFPPNVHNRTSHKQHTHTPEPVMPSPVTSPTSTFPVDPPLVHPVIQAAPPSELPAPVISPSLTPSRSFNGENGGQPVSAPLYKTPKSPPAIVHSPAQAPSEHKSRPLHHAPEPLISPPKSPINKEDHSPASLHSRNTITSPAPASSYFVSPPSSKHQDQPIPPSFLPSSGRRHYAPPPMNTGSAESPFTFPMQSPVSQDSPAPSPSFKISPHSTQIPFHPPQVSPSRPSSKSPKKPILPQVQALPPPPPNEDCLSTICSEPYTNSPPGVPCMCVWPMRVGLRLGVPLYTFFPLVSELASEIATGVFMKQSQVRIMGANTATEQPDKTDTLIDLVPLGEEFDNTTAFLTSERFWHKQVVIKASYFGDYEVLYVSYPGLPPSPPLPPSSINMIDGGPYLNNGNNGRTIKPLGVDIQKRQHKSGLSKGIIAIISLSAFLAVILCSAAVLAVFKFRDHVPEPQPTTSTPRGFPPSSTKATGTAGPSVASASTSFRSSIAAYAGSAKTFSMNEIVKATDNFHPSRILGEGGFGLVYSGNLEDGSKVAFKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELSFRCLVYELIPNGSVESHLHGVDREISPLDWSARIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSREGLEAIIDPSLGANVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSGSSSRDDLSSDFRSASEQLPDSFRGHHFSATNYDFGVDIENGLSASELFSSSARIGRQVSGSFRRHSYSGPLRTERSKRLWQIIRKLSGGSVSEHGIMFK 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01187 1445 MobiDBLite consensus disorder prediction 564 598 - -
Car01g01187 1445 Gene3D Transferase(Phosphotransferase) domain 1 1133 1352 - -
Car01g01187 1445 MobiDBLite consensus disorder prediction 239 254 - -
Car01g01187 1445 PANTHER OS01G0750732 PROTEIN 619 1445 - -
Car01g01187 1445 MobiDBLite consensus disorder prediction 599 615 - -
Car01g01187 1445 MobiDBLite consensus disorder prediction 424 473 - -
Car01g01187 1445 ProSiteProfiles Protein kinase domain profile. 1057 1333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01187 1445 MobiDBLite consensus disorder prediction 114 132 - -
Car01g01187 1445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1179 1191 IPR008271 GO:0004672|GO:0006468
Car01g01187 1445 Gene3D Phosphorylase Kinase; domain 1 1029 1132 - -
Car01g01187 1445 CDD STKc_IRAK 1063 1331 - -
Car01g01187 1445 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 619 1445 - -
Car01g01187 1445 MobiDBLite consensus disorder prediction 998 1025 - -
Car01g01187 1445 Pfam Protein tyrosine and serine/threonine kinase 1060 1330 IPR001245 GO:0004672|GO:0006468
Car01g01187 1445 ProSitePatterns Protein kinases ATP-binding region signature. 1063 1085 IPR017441 GO:0005524
Car01g01187 1445 MobiDBLite consensus disorder prediction 44 793 - -
Car01g01187 1445 MobiDBLite consensus disorder prediction 392 406 - -
Car01g01187 1445 MobiDBLite consensus disorder prediction 723 761 - -
Car01g01187 1445 MobiDBLite consensus disorder prediction 673 705 - -
Car01g01187 1445 MobiDBLite consensus disorder prediction 323 337 - -
Car01g01187 1445 MobiDBLite consensus disorder prediction 532 550 - -
Car01g01187 1445 MobiDBLite consensus disorder prediction 486 515 - -
Car01g01187 1445 MobiDBLite consensus disorder prediction 284 298 - -
Car01g01187 1445 SUPERFAMILY Protein kinase-like (PK-like) 1038 1330 IPR011009 -
Car01g01187 1445 MobiDBLite consensus disorder prediction 150 174 - -
Car01g01187 1445 MobiDBLite consensus disorder prediction 338 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01187 Car-Chr1 14217045 14239112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01187 565 1441 Receptor kinase-like Gene Family AT5G56890 55.519 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Car01g01187 PK_Tyr_Ser-Thr 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01187 - - lang:109328269 1594.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01187 01 14217045 14239112 Car01g01187 01 14217045 14239112 ECH