Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01181 ATGCCTCGCCGAGTGCTTCAAGGGGAAACCTCTAATGAGCACAAACATGAAACAATATTTTTTATCCTTGGAGGAATAGTAGTGATTACAATATTAGTGATTCTTTGGATTGTATTTTGGAAGCGTGCCAAAAGATCCTCGAAATTATTGGAAAAGAAAGTGACAACTGAAGGTGAACCTGTAGAGGCGATGAAAGTGGTATTTTCATCCACACAACAACAGCCATCAGGGTCCATGGAGTTGTTTAGTGCTAGCCTTCGGTCCACTAGCTACTTTAATTACCACATATTGAAGAAAGCAACCAATAACTTTTTTCATGCTAATCTTCTTGGAACTGGTGGATTTGGGCCTGTTTATCAGGGAAAGTTGGAAGATGGAAGGATGATTGTTGTTAAGACATTGTCTCTTAACAAATCCCATCAAGGTGAAAAAGAATTTTTGGCAGAGGTGAAATTGATCACTAGTGTCCAACACAAAAATTTGGTTCGTCTTCTTGGATGTTGCATAGATGGACCTCAAAGGATACTAGTTTATGAATATATAAAGAACAAAAGTTTGGACCTCTTCATATATGGAAACAGTGATCAATTTATAAATTGGAGAACTAGGTTCCAAATTATACTTGGAGTAGCAAGGGGGCTACAATACCTTCATGAAGATTCACACTTAAGAATTGTTCATGGAGATATCAAAGCAAGCAACATTCTTCTTGATGACAAGTTTTTACCAAGGATTGGAGACTTTGGGCTAGCCAGGTTTTTCCCTGGAGATCAAGCTTATCATCTTAGCACACAATTTGCAGGAACATTAGGCTATACAGCTCCTGAATATGCTATTAGAGGAGAATTGTCAGAAAAAACTGATATATATAGTTTTGGAGTTCTCCTTCTTGAAATTATTTCTAGTAAGAAAAACACAGATCATACTTTACCATCAGATATGCAATACCTGCCTGAATATGCATGGAAACTATACGAGAAATCAAGTTTATTGGATCTTGTTGATCCAAAGCTTAGAGAAGATGGATTTGTAGAAAAGGATGTTATGCAAACAACCCATGTGGCTCTCTTATGCCTTCAACCTCATGCACATTTGAGACCACCCATGTCAGAGATTGTGGCATTGTTGACATTCAAAATTGAAATGGTTACAACACCAATGAGACCGGCTTTCCTCGACCGGAGACGAAGAAAGGATGAAGATAACCATTCTTTTGAAGCATCTTTGCCAAGCCATTGA 1239 0.3793 MPRRVLQGETSNEHKHETIFFILGGIVVITILVILWIVFWKRAKRSSKLLEKKVTTEGEPVEAMKVVFSSTQQQPSGSMELFSASLRSTSYFNYHILKKATNNFFHANLLGTGGFGPVYQGKLEDGRMIVVKTLSLNKSHQGEKEFLAEVKLITSVQHKNLVRLLGCCIDGPQRILVYEYIKNKSLDLFIYGNSDQFINWRTRFQIILGVARGLQYLHEDSHLRIVHGDIKASNILLDDKFLPRIGDFGLARFFPGDQAYHLSTQFAGTLGYTAPEYAIRGELSEKTDIYSFGVLLLEIISSKKNTDHTLPSDMQYLPEYAWKLYEKSSLLDLVDPKLREDGFVEKDVMQTTHVALLCLQPHAHLRPPMSEIVALLTFKIEMVTTPMRPAFLDRRRRKDEDNHSFEASLPSH 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01181 412 ProSiteProfiles Protein kinase domain profile. 104 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01181 412 SUPERFAMILY Protein kinase-like (PK-like) 78 379 IPR011009 -
Car01g01181 412 Pfam Protein tyrosine and serine/threonine kinase 108 374 IPR001245 GO:0004672|GO:0006468
Car01g01181 412 SMART serkin_6 104 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01181 412 Gene3D Transferase(Phosphotransferase) domain 1 181 385 - -
Car01g01181 412 CDD STKc_IRAK 110 377 - -
Car01g01181 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Car01g01181 412 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 83 389 - -
Car01g01181 412 Gene3D Phosphorylase Kinase; domain 1 63 180 - -
Car01g01181 412 PANTHER RECEPTOR-LIKE KINASE 83 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01181 Car-Chr1 14059575 14063986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01181 92 405 Receptor kinase-like Gene Family AT1G56120 48.408 5.74e-100 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car01g01181 PK_Tyr_Ser-Thr 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01181 - - cam:101498319 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00314 07 2848425 2851803 Car01g01181 01 14059575 14063986 PCT