Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01167 ATGAGTTTTCTGAACGGTTCTTCACCTCACCGGAATCCGGCGGAGGATGATATTGAAGCTGGTCCGTTGTCTCGCCATTCTTCCGATGTCGACGACGGTGATTCCTCCGATCCGTTTGATATTGCTAGAACTAAGCATGCTTCTATTGATCGACTTAAGCGGTGGAGACAAGCGGCGCTTGTGCTAAATGCCTCTCGTCGATTTCGTTATACCTTGGACTTGAAAAAAGAGGAAGAGAAGAAGCAAATACTGAGAAAGATTAGAGCGCATGCACAAGCCATTAGAGCTGCGTATCTTTTCAAAGCAGCTGGGGGGCAACGGCTAGAGCAAGGGCAAGGTCCCGTGAGTGGAGATACAAAACCTGCTTTGACTTCTACTGGTGAATTTCCAATTGGACCAGAGCAACTTGCTTCGATTTCAAGGGAGCATGATACTGCTTCTCTGCAGCAATATGGAGGGGTTGCAGGGGTATCAAATTTATTGAAAACCGATTTAGAGAAGGGAGTTAATGGTGATGATGCCGACTTACTAAGACGGAGGAATGCATTTGGTTCCAACAATTACCCTCGAAAGAAAGGAAGAAGTTTTATGATGTTTATGTGGGATGCTTGCAAGGATCTGACCTTGGTTATATTAATGGTAGCTGCAGCAGCTTCATTGGCACTGGGGATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTATAAGCGATTATAAGCAGTCTCTTCAGTTTCGAGACCTAAATGAAGAGAAGAGAAATATACATCTGGAGGTTATTAGAGGTGGTAGAAGGGTTGAGATCTCAATATATGACCTTGTTGTTGGGGATGTTATACCCCTTAATATTGGTAACCAGGTCCCTGCTGATGGAATTCTCATCACTGGTCACTCTCTTTCAATTGATGAGTCAAGCATGACAGGGGAGAGCAAAATTGTCCATAAGGATTCTAAGGATCCCTTTCTGATGTCTGGGTGTAAGGTTGCAGATGGCAGTGGCACTATGCTGGTAACAGGTGTTGGAATCAATACCGAGTGGGGCCTTCTAATGGCTAGTATTTCAGAAGATACTGGTGAAGAAACACCTTTGCAGGTCCGCTTAAATGGTGTAGCCACCTTCATTGGTATTGTTGGACTCAGTGTTGCTGTTCTTGTCCTGATTGTGCTACTGGCCAGATATTTCTCTGGGCATACTGAGAATGCTAATGGGACGAAACAATTTGTAGCAGGCAAGACTAGAGTTCGGGATGCTGTTGATGGAGCAATTAAGATAATAACTGTTGCGGTCACTATTGTAGTTGTTGCAGTGCCTGAGGGACTCCCACTTGCAGTCACTTTAACACTTGCCTACTCAATGAGAAAAATGATGGCAGATAAAGCTTTGGTGAGGAGGCTCTCTGCGTGTGAGACAATGGGCTCTGCTACAACCATATGCAGTGATAAGACTGGCACATTGACTATGAATAAGATGACTATTGTTGAGGTTTACGCCGGGGGCACGAAGATTGATCCTCCTCACCAGTTGGAGAGCTCTCCTAAGCTACGCTCTCTACTCATTGAAGGAGTTGCACAGAACACTAATGGAAGCGTTTATGTCCCTGAGGGTGGCAATGATGTTGAGGTTTCTGGATCACCAACAGAGAAGGCAATTTTACATTGGGCAATACAGGTCGGAATGAATTTTGCGACTGCTCGGTCAGAATCATCAATTATTCATGTCTTTCCATTCAATTCCGAGAAAAAAAGAGGCGGAGTTGCAATACAGACGGCTGACTCTGATGTTCATATACATTGGAAAGGTGCTGCTGAGATTGTTCTAGCCTGCTGTACAGGGTATATTGATACAAATGACCAGTTGATGGAGATGGATGAGGAGAAGATGACTTCTTTCAGAGAAGCTATTGAAAACATGGCTGCTGATAGTCTGCGTTGTGTTGCCATTGCATATAGATCGTATGAGAAGGAGAAAGTTCCAAATAATGAGGACCTACTTGCTCAATGGTCTTTGCCAGATGATGAACTTGTTTTACTAGCTATTGTTGGCATCAAGGATCCTTGTCGACCTGGTGTCAAAGAGTCAGTACAGCTTTGCCAAAAAGCTGGGGTTAAGGTAAAGATGGTCACCGGTGACAATGTCAAAACTGCAAAAGCAATTGCTGTGGAATGTGGAATACTTGGTTCGTATGCTGACGCTACAGAACGAAGTGTCGTTGAAGGAAAAACATTTCGTGCATTGTCAGATGCAGAGAGAGAAGAAATTGCAGATACAATATTGGTTATGGGAAGGTCATCTCCCAATGACAAACTATTGTTAGTACAAGCATTGAGGAGGAAGGGCCATGTTGTGGCTGTAACAGGGGATGGAACGAATGATGCCCCTGCACTTCATGAGGCGGATATAGGTCTTGCAATGGGTATTCAAGGTACAGAAGTTGCCAAAGAGAGCTCTGATATCATTATTTTGGATGACAACTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGACGATCTGTTTATGCAAATATTCAGAAATTTATCCAGTTTCAGCTGACAGTCAATGTGGCAGCTCTTGTTATAAATGTTGTTGCTGCAGTTTCCTCTGGTGAAGTTCCCCTGAATGCAGTGCAGCTTCTCTGGGTAAATCTTATCATGGATACTCTAGGAGCACTAGCCTTGGCAACTGAACCACCAACTGATCACCTAATGGATCGGTCTCCTGTGGGTCGAAGAGAACCTCTCATAACAAATATTATGTGGCGGAATTTGCTGATACAGGCGATATATCAAGTGTCTGTCTTGCTTGTTCTCAATTTCCGAGGTATCTCCATACTAGGTCTGGAGCATGAGCAGACTGAACACGCAACCAAAGAAAAGAACACTTTGATCTTTAATGCATTTGTTATCTGTCAAATATTTAATGAATTTAATGCACGTAAGCCAGATGAATTCAACATTTTTAAAGGAGTCACGAAAAACTACCTCTTTATGGGGATAATAGCCTTCACTGTTGTGCTTCAGGTTATCATCGTTGAATTTCTCGGGAAGTTCACTACAACTACCAGGCTTAATTGGAAGCAGTGGCTCATTTCTGTTGCTATTGGATTCATTGGTTGGCCTCTTGCTGTGGTTGGGAAATTGATACCAGTACCGGCAACTCCGATCAATAACGTATTCCCTAAGTTTAGAAGAACTTCAAAAAAGAAGGAACCTGAGACTTCCCAATAG 3273 0.4339 MSFLNGSSPHRNPAEDDIEAGPLSRHSSDVDDGDSSDPFDIARTKHASIDRLKRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKAAGGQRLEQGQGPVSGDTKPALTSTGEFPIGPEQLASISREHDTASLQQYGGVAGVSNLLKTDLEKGVNGDDADLLRRRNAFGSNNYPRKKGRSFMMFMWDACKDLTLVILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVIRGGRRVEISIYDLVVGDVIPLNIGNQVPADGILITGHSLSIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVLVLIVLLARYFSGHTENANGTKQFVAGKTRVRDAVDGAIKIITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNKMTIVEVYAGGTKIDPPHQLESSPKLRSLLIEGVAQNTNGSVYVPEGGNDVEVSGSPTEKAILHWAIQVGMNFATARSESSIIHVFPFNSEKKRGGVAIQTADSDVHIHWKGAAEIVLACCTGYIDTNDQLMEMDEEKMTSFREAIENMAADSLRCVAIAYRSYEKEKVPNNEDLLAQWSLPDDELVLLAIVGIKDPCRPGVKESVQLCQKAGVKVKMVTGDNVKTAKAIAVECGILGSYADATERSVVEGKTFRALSDAEREEIADTILVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGEVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAIYQVSVLLVLNFRGISILGLEHEQTEHATKEKNTLIFNAFVICQIFNEFNARKPDEFNIFKGVTKNYLFMGIIAFTVVLQVIIVEFLGKFTTTTRLNWKQWLISVAIGFIGWPLAVVGKLIPVPATPINNVFPKFRRTSKKKEPETSQ 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01167 1090 PANTHER CATION TRANSPORTING ATPASE 23 1079 - -
Car01g01167 1090 SUPERFAMILY Calcium ATPase, transmembrane domain M 151 1065 IPR023298 -
Car01g01167 1090 ProSitePatterns E1-E2 ATPases phosphorylation site. 496 502 IPR018303 -
Car01g01167 1090 PRINTS Sodium/potassium-transporting ATPase signature 237 257 - -
Car01g01167 1090 PRINTS Sodium/potassium-transporting ATPase signature 487 508 - -
Car01g01167 1090 PRINTS Sodium/potassium-transporting ATPase signature 612 630 - -
Car01g01167 1090 PRINTS P-type cation-transporting ATPase superfamily signature 318 332 - -
Car01g01167 1090 PRINTS P-type cation-transporting ATPase superfamily signature 494 508 - -
Car01g01167 1090 PRINTS P-type cation-transporting ATPase superfamily signature 694 705 - -
Car01g01167 1090 PRINTS P-type cation-transporting ATPase superfamily signature 716 726 - -
Car01g01167 1090 PRINTS P-type cation-transporting ATPase superfamily signature 801 820 - -
Car01g01167 1090 PRINTS P-type cation-transporting ATPase superfamily signature 825 837 - -
Car01g01167 1090 SFLD C1.7: P-type atpase like 476 853 - -
Car01g01167 1090 PANTHER CALCIUM-TRANSPORTING ATPASE 23 1079 - -
Car01g01167 1090 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 768 881 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car01g01167 1090 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 435 517 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car01g01167 1090 Gene3D - 175 370 - -
Car01g01167 1090 Pfam Cation transporting ATPase, C-terminus 886 1062 IPR006068 -
Car01g01167 1090 Gene3D - 47 102 - -
Car01g01167 1090 SMART Cation_ATPase_N_a_2 150 224 IPR004014 -
Car01g01167 1090 Pfam E1-E2 ATPase 272 472 - -
Car01g01167 1090 Pfam Cation transporter/ATPase, N-terminus 152 219 IPR004014 -
Car01g01167 1090 CDD P-type_ATPase_Ca_PMCA-like 176 934 - -
Car01g01167 1090 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 143 1065 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Car01g01167 1090 SFLD p-type atpase 476 853 IPR044492 -
Car01g01167 1090 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 501 698 IPR023299 GO:0000166
Car01g01167 1090 Gene3D - 202 1052 - -
Car01g01167 1090 Gene3D - 491 846 IPR023214 -
Car01g01167 1090 MobiDBLite consensus disorder prediction 12 39 - -
Car01g01167 1090 Pfam haloacid dehalogenase-like hydrolase 491 815 - -
Car01g01167 1090 SUPERFAMILY Calcium ATPase, transduction domain A 272 367 IPR008250 -
Car01g01167 1090 Pfam Ca2+-ATPase N terminal autoinhibitory domain 36 79 IPR024750 GO:0005516
Car01g01167 1090 SUPERFAMILY HAD-like 492 906 IPR036412 -
Car01g01167 1090 MobiDBLite consensus disorder prediction 1 39 - -
Car01g01167 1090 Gene3D - 504 701 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01167 Car-Chr1 13770033 13789376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01167 1 1084 Primary Pumps ATPases AT5G57110 73.088 0.0 1599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01167 K01537 - gmx:100792945 1833.15