Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01141 ATGAGGTTGTTGGTGGAGTTTGGGTGTGTATTTATGATTCTATTTGCTCTTGTGTTATATGGTGAGGCAGAGGTTTACATAGTAACTGTTGAAGGTGAGCCTATCATAAGTTACACTGGTGGTATTGATGGGTTTGAAGCCACTGCTGTTGAATCTGATGAGAAGATTGATACCTCAAGTGAGTCGGTGACTTCTTATGCGCGCCATCTTGAAAATAGACATGATATGCTTCTGGGGATGCTGTTTGACCGTGGGACATATACGAAACTCTATAGCTATAGACATCTTATAAATGGGTTTGCAGTTCATCTTTCCCCAGAACAGGTAGAAACTCTTAGACACGCTCCTGGTGTGAAATCTATTGAGAGGGACTGGAAAGTGAGGAGACTTACAACGCATACGCCAGAATTTTTGGGGCTTCCAACCAGTGTTTGGCCAACAGGAGGCGGCTGTGATAGGGCTGGAGAGGACATTGTGATTGGATTTGTCGACTCTGGGATATATCCTCACCACCCAAGCTTTGCGACTCATAATACTGAACCATATGGACCACTTTCAAAATATAGAGGAAAATGTGAAGTTGATCCTGAGACTAAAAAAAGTTTCTGTAATGGAAAGATTATAGGAGCACAACATTTTGCTCAAGCTGCAAAAGCTTCTGGAGCATTTAATCCTTCAATTGATTTTGCGTCTCCTCTCGATGGAGATGGCCATGGAAGTCATACAGCCTCTATTGCAGCTGGAAGAAATGGAATTCCTGTGAGGCTGCATGGACATGAATTTGGTAAAGCAAGTGGAATGGCTCCCCGTGCCAGGATTGCTGTGTACAAAGCACTCTATAGACTGTTTGGAGGGTTTGTTGCAGATGTAGTTGCTGCACTTGATCAGGCTGTACATGATGGAGTGGATATACTCAGCCTTTCAGTTGGACCAAATAGCCCGCCCGCCGCCACGAAAACCACGTTTTTGAATCCTTTTGATGCTACACTTCTTGGGGCTGTGAAAGCTGGTGTGTTTGTTGCACAGGCTGCAGGAAATGGTGGCCCTTTTCCTAAGTCATTAGTTTCATATAGTCCGTGGATAGTATCTGTGGCAGCTGCAATTGATGATCGTAGATATAAAAACCATCTGACCCTTGGAAATGGAAAAATCTTAGCAGGACTTGGGTTGTCACCTTCTACACATTTAAACCAAACATACACATTGGTTGCTGCAAACGACGCGCTGCTAGATTCTTCAGTTATGAAGTACAGCCCATTAGATTGCCAGAGACCAGAGGTCCTAAACAAGAATTTGATAAAGGGGAAAATTCTTCTCTGTGGCTATTCTTTCAACTTTGTTGTTGGTACTGCATCAATAAAGAAAGTTTCAGAAACAGCAAAGGCCCTTGGAGCAGTTGGATTTGTTCTCTGTGTAGAAAATGTTTCTCCTGGAACGAAGTTTGACCCCGTCCCTGTTGGCCTTCCTGGGATTCTAATCACAGATGTCAGCAAGTCAAAGGAATTGATAGATTATTATAATATCTCCACATCAAGAGACTGGACTGGAAGAGTGAAGACTTTCAAAGGTATAGGTAAAATTGGGGATGGTTTGAGGCCTATTCTCCATAAATCCGCACCACAGGTGGCATCATTCTCTGCTAGAGGGCCAAATATAAAGGATTTCAGCTTCCAAGACGCCGACCTCCTTAAACCAGATATATTAGCTCCGGGTTCGTTGATTTGGGCTGCTTGGTCTCTAAACGGAACTGATGATTCAAATTATGATGGAGAAGGATTTGCCATGATGTCTGGAACTAGCATGGCTGCCCCACACATTGCTGGAATTGCTGCTCTTTTAAAGCAGAAACATCCACGTTGGAGCCCTGCAGCCATTAAATCAGCCTTGCTTACAACATCAACAACTCTAGACAGAGCAGGAAGCCCAATTCTAGCACAGCAATATTCTGAAACAGAAGCCGTGAAACTGGTCAGAGCCACTCCTTTTGATTATGGAAGTGGACATGTGAATCCAAGAGCAGCCATGGACCCTGGGCTCATCTTTGATGCAGGATACAACGACTATTTAGGATTCTTGTGCACAACACCTGGCATTGATGTTCATGAGATAAAGAACTACACAAACTCACCATGTAACAAAACTATGGGCCAGCCATATAATTTAAACACTCCATCCATTACAATTTCCCATCTTGTGAGAACTCAAATTGCAACCCGCACAGTCACAAATGTTGCTAAGGAAGTAGAAACCTACGTGATGACAGCTAGAATGCAACCAGCAATTGCCATTGAAGTGAACCCTCCAGCAATAACCATCAAAGCTGGTGCATCACGTAGGTTTACCGTGACACTTACTGTTCGGACAGTGACAGGAACATATAGTTTTGGAGAGGTTTTGATGAAGGGAAGTAGAGGACACAAAGTGAGGATCCCTGTTCTGGCTAATGGTTACTCAAGATAG 2460 0.4358 MRLLVEFGCVFMILFALVLYGEAEVYIVTVEGEPIISYTGGIDGFEATAVESDEKIDTSSESVTSYARHLENRHDMLLGMLFDRGTYTKLYSYRHLINGFAVHLSPEQVETLRHAPGVKSIERDWKVRRLTTHTPEFLGLPTSVWPTGGGCDRAGEDIVIGFVDSGIYPHHPSFATHNTEPYGPLSKYRGKCEVDPETKKSFCNGKIIGAQHFAQAAKASGAFNPSIDFASPLDGDGHGSHTASIAAGRNGIPVRLHGHEFGKASGMAPRARIAVYKALYRLFGGFVADVVAALDQAVHDGVDILSLSVGPNSPPAATKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKSLVSYSPWIVSVAAAIDDRRYKNHLTLGNGKILAGLGLSPSTHLNQTYTLVAANDALLDSSVMKYSPLDCQRPEVLNKNLIKGKILLCGYSFNFVVGTASIKKVSETAKALGAVGFVLCVENVSPGTKFDPVPVGLPGILITDVSKSKELIDYYNISTSRDWTGRVKTFKGIGKIGDGLRPILHKSAPQVASFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSLNGTDDSNYDGEGFAMMSGTSMAAPHIAGIAALLKQKHPRWSPAAIKSALLTTSTTLDRAGSPILAQQYSETEAVKLVRATPFDYGSGHVNPRAAMDPGLIFDAGYNDYLGFLCTTPGIDVHEIKNYTNSPCNKTMGQPYNLNTPSITISHLVRTQIATRTVTNVAKEVETYVMTARMQPAIAIEVNPPAITIKAGASRRFTVTLTVRTVTGTYSFGEVLMKGSRGHKVRIPVLANGYSR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01141 819 CDD PA_subtilisin_like 377 515 - -
Car01g01141 819 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 160 171 IPR023827 -
Car01g01141 819 SUPERFAMILY Protease propeptides/inhibitors 63 128 - -
Car01g01141 819 ProSiteProfiles Serine proteases, subtilase domain profile. 124 675 - -
Car01g01141 819 Gene3D - 692 816 - -
Car01g01141 819 Gene3D Peptidase S8/S53 domain 157 688 IPR036852 GO:0004252|GO:0006508
Car01g01141 819 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 818 IPR045051 -
Car01g01141 819 CDD Peptidases_S8_3 131 634 IPR034197 -
Car01g01141 819 PANTHER CUCUMISIN-RELATED 15 818 - -
Car01g01141 819 Pfam Fibronectin type-III domain 720 813 IPR041469 -
Car01g01141 819 Pfam Subtilase family 155 639 IPR000209 GO:0006508|GO:0008236
Car01g01141 819 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 129 IPR037045 -
Car01g01141 819 Pfam Peptidase inhibitor I9 25 128 IPR010259 -
Car01g01141 819 Gene3D - 370 535 - -
Car01g01141 819 SUPERFAMILY Subtilisin-like 130 679 IPR036852 GO:0004252|GO:0006508
Car01g01141 819 PRINTS Subtilisin serine protease family (S8) signature 155 174 IPR015500 -
Car01g01141 819 PRINTS Subtilisin serine protease family (S8) signature 234 247 IPR015500 -
Car01g01141 819 PRINTS Subtilisin serine protease family (S8) signature 597 613 IPR015500 -
Car01g01141 819 ProSitePatterns Serine proteases, subtilase family, serine active site. 598 608 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01141 Car-Chr1 11728329 11735345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01141 5 819 Subtilisin-like Serine Gene Family AT4G30020 79.657 0.0 1355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01141 - - gmx:100784999 1462.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00288 07 2607891 2613978 Car01g01141 01 11728329 11735345 PCT