Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01122 atGGGAGGTCCTAGCATGATGAATATTGTGTTTATATCAAAGTTGTTTCTTGTAGTTTGTGCACAAAGAAGCTCAACTGAACTTACAAAAGGGTTCTACAGCAATACATGTCCAAATGTTGAACAATTAGTTCGTTCTGCCGTGGAGCTCAAGTTCCAGCAAACCTTTGTCACTGCTCCTGCCACTCTTCGTCTCTTCTTCCATGATTGTTTTGTTAGGGGTTGTGATGCTTCAATTTTGCTTGTATCTCCAAATAATAAAGCAGAGAAAGATCATCCTGATGACATTTCATTAGCTGGTGATGGTTTTGACACTGTGATTAAAGCTAAACAAGCTATTGATAGTGATCCTCAGTGCACAAACAAAgtctcttgtgctgatatacttgctcttgctacaagggatgttgttaatttgAGTGGGGGACCCTTTTATGAAGTTGAATTGGGAAGGCGTGATGGAAGAATATCTACAATTGCAAGTGTTCAACGCCATCTTCCTCATCCtcaattcaatttggatcaactcaattcaatGTTTAGCTTCAATGGCCTCTCCCAAATTGATATGATTGCTTTATCAGGTGCACATACAATTGGATTCTCTCATTGCAACCGGTTCTCAAAAAGAATCTACAACTTCAGCCCAACAAGTAGAATTGACCCAACACTAAATTTACAATATGCCTTTCAACTTAGACAAGCATGTCCTCTAAAAGTTGATCCTAGGATTGCAATAAATATGGACCCTATCACACCTCAAAAGTTTGACAACCAATATTTCAAGAATTTGCAACAAGGAATGGGACTCTTTACTTCGGATCAAGTATTGGCTATAGATGAAAGGTCAAAAGACACAATCAACTTATTTGCATCAAATGAAGTAGCTTTTGAAAGTGCTTTTGTTGATGCTATTACTAAGTTGGGAAGGATTGGTGTTAAAAGTGGAAATCAAGGTGAAATAAGGTTTGATTGCTCAAGTGTGAACTAA 990 0.3495 MGGPSMMNIVFISKLFLVVCAQRSSTELTKGFYSNTCPNVEQLVRSAVELKFQQTFVTAPATLRLFFHDCFVRGCDASILLVSPNNKAEKDHPDDISLAGDGFDTVIKAKQAIDSDPQCTNKVSCADILALATRDVVNLSGGPFYEVELGRRDGRISTIASVQRHLPHPQFNLDQLNSMFSFNGLSQIDMIALSGAHTIGFSHCNRFSKRIYNFSPTSRIDPTLNLQYAFQLRQACPLKVDPRIAINMDPITPQKFDNQYFKNLQQGMGLFTSDQVLAIDERSKDTINLFASNEVAFESAFVDAITKLGRIGVKSGNQGEIRFDCSSVN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01122 329 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 SUPERFAMILY Heme-dependent peroxidases 28 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601|GO:0042744
Car01g01122 329 PANTHER - 14 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 Pfam Peroxidase 45 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Car01g01122 329 Gene3D Peroxidase, domain 2 167 308 - -
Car01g01122 329 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g01122 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Car01g01122 329 Gene3D - 31 329 - -
Car01g01122 329 PANTHER PEROXIDASE 16-RELATED 14 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01122 Car-Chr1 11373711 11376804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01122 12 329 Peroxidase AT2G18980 72.327 1.47e-171 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01122 K00430 - gmx:100807430 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00277 07 2524070 2525591 Car01g01122 01 11373711 11376804 PCT