Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01119 ATGGAAGGCCAAAAAGCTAAACGTAGACGTGTTTATTCAGTTGAACCAAACAAAGTAGTACAAGCAACATTTACTAGAAACTACATTAACTATTTAGCACCAACTTTGATGAAGATCAAGGAAAAAAGTTCCATACAAGACAATAACTTTTGTGGTGATATTCAAAATGTTATAAAGTATGAAGTGGACATGGCCATGGTTTTTTCAGCTCAAGGTTATGCATGGAGTAATGCTCTAAAATTGAAGCTTCAAAAGGGTGATAGTGGTGAAGGTTCATCAAAGATTTATCACCAAAATGAAATGGGCCCACTTGAAAAAAATTGTTCAAAAAAAGAGGGTAATACTAAGATTTTGGTGAAAAATAATTTGGTTGAAGAAAATAATATTGATGAAGATGATGAGATTGTGAATAGGCAGTTGATGTGTCTTAGAAAGTTGATACCAGGAGGAGAAGAGATGTGTCAAGAGCAAATGGTGAATGAATTAGAGAGCTATGTAAGTTGTTTGCAAATGCAAGTGAATATTCTTAAGTGTCTCACTCATGAGACAAGTTAG 555 0.3387 MEGQKAKRRRVYSVEPNKVVQATFTRNYINYLAPTLMKIKEKSSIQDNNFCGDIQNVIKYEVDMAMVFSAQGYAWSNALKLKLQKGDSGEGSSKIYHQNEMGPLEKNCSKKEGNTKILVKNNLVEENNIDEDDEIVNRQLMCLRKLIPGGEEMCQEQMVNELESYVSCLQMQVNILKCLTHETS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01119 184 CDD bHLH_AtIBH1_like 130 180 IPR044549 GO:0006355
Car01g01119 184 PANTHER TRANSCRIPTION FACTOR BHLH146 3 182 - -
Car01g01119 184 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 182 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01119 Car-Chr1 11270401 11271427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01119 7 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 31.461 8.78e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01119 - - aprc:113852314 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00274 07 2516757 2517815 Car01g01119 01 11270401 11271427 PCT