Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01113 ATGCGTCCACCAGTGAAGAGGATTGATTACAAAGTAGGAGACAAAGTGGAAGTATGCAGCAAAGAACAAGGGTTTGTGGGATCGTACTACGAAGCCACAATTGTTTCATGTCTTGAGAATGGAAAATATGTTGTTCGTTACAAGAATCTTCTAGAAGATGACAATTCTAAACCTCTCAAAGAGACAATTTTCCCAAAAGAGCTTCGTCGATTACCGCCACATGTCCGAAATCTCCCCGAGTTTCGGCTAAACCAAAAAGTTGATGTATTTGATAACGATGGTTGGTGGTTAAGGAAAATCATTAGTGAGAAGATCCTCTCACGAAAGAGGTATTACTATATGGTATATTTCTTTACTACTCATGAAGTGATTTACTACCCTTGTAATCGAATAAGGGTTCATGAGTGGTTTCATCGAGAGTGGATCTTGGAAGCTTAA 438 0.3904 MRPPVKRIDYKVGDKVEVCSKEQGFVGSYYEATIVSCLENGKYVVRYKNLLEDDNSKPLKETIFPKELRRLPPHVRNLPEFRLNQKVDVFDNDGWWLRKIISEKILSRKRYYYMVYFFTTHEVIYYPCNRIRVHEWFHREWILEA 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01113 145 Pfam Agenet domain 13 73 IPR008395 -
Car01g01113 145 PANTHER - 8 144 - -
Car01g01113 145 SMART agenet_At_2 79 143 IPR014002 -
Car01g01113 145 SMART agenet_At_2 8 76 IPR014002 -
Car01g01113 145 Gene3D - 5 76 - -
Car01g01113 145 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01113 Car-Chr1 11172537 11172974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01113 20 113 PHD Transcription Factor Family AT5G58610 31.034 2.47e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01113 - - cam:101489110 207.608