Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01111 ATGGAAGCACAAAGTGGTCGCCATCCGCAAATAATTGAAATCAGTGGAGATCTTCCTGATGTAGGAAAGAAAATTTGTGGGGAAGCAACATGTGAGTTCTCAGATGCTGGATCCATCTTGAAGGATTCTGAAGAAAGATCGACTTCCATGCGAAAGCTTTTGATAGCCGTGACCCTTTGCGTTATTTTCATGGCCGTTGAGGTAGTTGGTGGTATTAAGGCTAACAGTCTCGCAATATTGACTGACGCAGCACATTTGCTTTCCGACGTTGCAGCATTTGCCATCTCATTGTTTTCTATATGGGCTGGGGGATGGGAACCGAATCCTCGCCAATCGTTTGGATTTTTTAGAATAGAGATTCTTGGCGCTTTGGTTTCCATGCAATTAATATGGTTGCTTGCTGGGATTTTGGTATATGAAGCCATTGCTAGACTCATTGCAGGTCCTCAAAATGTGGATGGTTTTTTAATGTTCATAGTTGCTGCATTTGGTCTTCTGGTTAACATCATTATGGCTTTGGTATTGGGTcatgatcacggtcacagtcacggccacggccatgatcacggccacggacatgatCATCATGGCCACAGCCATGGACTTTCCGTTTCTACCCATCATCACGATGTAAAGCATACAAAAGATGAGcatcatcacagtcacgacgatcacactcaccatcatcatgatgaaaagcattctcatgaagatcacgctcatcatcatGACCACAAAGTGGTTACTCAACCACTTCTCACTGAATCAAATGGCAGATCCGAGAAAAAGAAACGGAACATAAATGTACATGGCGCTTATCTCCATGTACTTGGCGACTCTATCCAGAGTGTTGGGGTAATGATTGGAGGAGCAATCATATGGTATAAGCCTGAATGGAAAATAGTTGATTTGATTTGCACTCTAATTTTTTCTGTAATTGTTTTGGCCACAACTATCAACATGCTGAGAAATATTTTGGAAGTCCTGATGGAGAGCACACCGCGCGAGATAGACGCTACTCAGCTTCAAAAGGGGCTGTTGGAGATGGAAGAAGTAGTAGCTGTTCATGAACTGCACATATGGGCCATTACAGTGGGGAAGGTATTGCTAGCTTGTCATGTTAAAATCAATCCCGAAGCAGATGCCGACGTGATGCTGGACAAGGTTATAGACTACATCAAGAGGGTTCATAACATCAGTCACGTAACTATACAGATAGAACGCTAG 1227 0.3814 MEAQSGRHPQIIEISGDLPDVGKKICGEATCEFSDAGSILKDSEERSTSMRKLLIAVTLCVIFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWAGGWEPNPRQSFGFFRIEILGALVSMQLIWLLAGILVYEAIARLIAGPQNVDGFLMFIVAAFGLLVNIIMALVLGHDHGHSHGHGHDHGHGHDHHGHSHGLSVSTHHHDVKHTKDEHHHSHDDHTHHHHDEKHSHEDHAHHHDHKVVTQPLLTESNGRSEKKKRNINVHGAYLHVLGDSIQSVGVMIGGAIIWYKPEWKIVDLICTLIFSVIVLATTINMLRNILEVLMESTPREIDATQLQKGLLEMEEVVAVHELHIWAITVGKVLLACHVKINPEADADVMLDKVIDYIKRVHNISHVTIQIER 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01111 408 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 331 IPR027469 -
Car01g01111 408 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 337 407 IPR036837 -
Car01g01111 408 MobiDBLite consensus disorder prediction 195 249 - -
Car01g01111 408 TIGRFAM CDF: cation diffusion facilitator family transporter 50 408 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Car01g01111 408 Pfam Cation efflux family 53 330 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Car01g01111 408 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 408 - -
Car01g01111 408 MobiDBLite consensus disorder prediction 181 264 - -
Car01g01111 408 PANTHER METAL TOLERANCE PROTEIN A1 1 408 - -
Car01g01111 408 Gene3D Cation efflux protein transmembrane domain 49 329 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01111 Car-Chr1 11137485 11142129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01111 1 408 Inorganic Solute Cotransporters AT2G46800 64.833 8.46e-175 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01111 K14689 - gmx:100790458 556.599