Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01103 ATGGAAGAGGAACATAAGGGGGGTGAAGAAGTAAAGTACCGGGGTGTAAGGAAAAGGCCATGGGGAAAGTATGGGGCAGAGATTAGAGATCCAACAAAACCAACTGGAAGACAATGGTTAGGAACATTTGATACAGCTGAAGAAGCAGCTAGAGCTTATGATTGTGAAGCCATTCGTTTGAGGGGTGCTCTTGCTATTCTTAATTTTCCTAATGAATACAATTTTCATCTTTCTTCTTTATCACCATCAACATCTACTACCACTAACATTCATACCAATTCTTCTACACAACACAAGGAAATTATTGAGTTTGAGTATTTGGATAACAAGGTTTTGGAAGACCTTCTTGGGTTGTCGGAAAAAGataatcaaaacaaggaagaataa 387 0.3695 MEEEHKGGEEVKYRGVRKRPWGKYGAEIRDPTKPTGRQWLGTFDTAEEAARAYDCEAIRLRGALAILNFPNEYNFHLSSLSPSTSTTTNIHTNSSTQHKEIIEFEYLDNKVLEDLLGLSEKDNQNKEE 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01103 128 Pfam AP2 domain 12 62 IPR001471 GO:0003700|GO:0006355
Car01g01103 128 PANTHER ETHYLENE RESPONSE FACTOR 3 121 - -
Car01g01103 128 SUPERFAMILY DNA-binding domain 12 71 IPR016177 GO:0003677
Car01g01103 128 ProSiteProfiles AP2/ERF domain profile. 12 70 IPR001471 GO:0003700|GO:0006355
Car01g01103 128 PANTHER DNA-BINDING DOMAIN 3 121 IPR044808 GO:0003700|GO:0009873
Car01g01103 128 CDD AP2 12 71 IPR001471 GO:0003700|GO:0006355
Car01g01103 128 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Car01g01103 128 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Car01g01103 128 Gene3D AP2/ERF domain 11 71 IPR036955 GO:0003700|GO:0006355
Car01g01103 128 SMART rav1_2 12 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01103 Car-Chr1 10995741 10996360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01103 9 121 AP2-EREBP Transcription Factor Family AT3G23230 54.098 6.09e-38 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car01g01103 AP2 6.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01103 - - gmx:100807295 169.859