Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01096 ATGGACATATCTCGATATGTATCATATGTCTTCCACAACATGCAAAAATTGCTACGTCATGACCATAGAAGTATAAGGAGTACTGGCGATTTTCTCTTATGTGGCAATATTGATGATAAAGTTGATCCAAATTCTGAAATGGATCGTAATAGCGATGTTCCCGTGTGCTCTACTAGCACAGTTAATATTTCACACTCACACCAGAGTTTCTGTGGCTTTGTGCAACAGCCTGCATTTGTGAGTGGATGGATGTATGTGAATGAACAGGGACAAATGTGTGGTCCCTATATTAAGGAGCAGTTATATGAGGGCCTAACTACTGGTTTCTTGCCATTTGAACTTCCTGTGTATCCTGTGATTAATGGCACAATAATGAACCCTGTGCCATTGAATTATTTCAAACAGTTTCCTGACCATGTTTCCACTGGGTTTGCATTTCTGAGTATGGACTTCTCAGGCACAAGGATGCCAACAAATTGCTCCTCTTCTTCTCTTCTGGCTGTTAACCCTGATTCAATGATAATTTCTTGTCAGATGGTTGGAGGAGAATGCTGCTGGCTTTATGAGGATAAAAAGGGTATCAAACATGGGCCGCATTCCATTTCAGAATTGATTTCCTGGTACCACCATGGATATCTTGAAGATTCAACAGTGATCTCTCATTTTGACAATAAGTATGGAACCTTTATGTTGCTGTCTGCTGTAAATGCCTTGAAAGAAGATATATCTGGAACCATCTGTGGATCAGATTCCAAAAGCAATGGAGTTGGTAATGTGGTGAACTTAGTTTGTGAAATATCTGAAAACATTTCTTCCCAATTGCACATGGGTATAATGAAAGCTGCCCGTAGAGTTGTGCTAGATGGAATTATTGGTGATATCATTGCAGAATTTGTTACTGAAAAGAAATACAATAGGCATAAGCTTGAGTCTGCTGATCAAACTTCTGAAACTTGCATGTTGGACAGTAAAATGATGAATAAACGTACTTCCATTTCAAGTGAGCCTGCACCTTCCCATATTTTGGACGGTCAGGCTTGTCATGAAATTTCCAGACCATCCTTAACAAGTGTTAAATCAGTTGGAAGCATTGAAAATTTTTGGTGGTCATATGCTGCTGTTCGTAAAGTACTTTTTGAACATTGCTTGCAAGTCATGTGGAATGCAATTTTTTCTGACACTGTAACAGAGTATGTATTTTCCTGGAGGAAGAGGAAACGTTGGTCTCATCCTACGCCTCAATCATCTGTTAATGAATCTAAAGATTATGTTGATATGATTAAATCAGAAGCTTTGGTTCTCAGGCCAGGTTCCTCTGTATGCAATGTTGATGGTGATATCCAGTCTGGAGTGATGAAGACAGAAAGAGATTGTCATACTGAGTTATTTTCATCTCCTAATAACCTCAAAAGCAGAAACTTACCAGAAGGTCAAACAGTTTCATGCAGTGATCATAACTCTAAAGATTTGACATGCATTATTGGAATTGTGGAGAATGAGCTTCACATCTCTTCGAAGGAATCTTTAGCTGATTACGTTCAAAGTGTTGTTGACAAGGAAGTAAACAAATTAATTCCTTCCTTAGAGAAAGACAGATCTAGTGAGGTTGATGTTAGTGACTGCCATTTATCGGAGATGCTTACTGGTAAAACATCTGTTAATAAAGTTCTAAATGACAAGTCTATTGATCCTGTGAAAAGTGGAGACTCAATTTGTGTGCCTTCATCTGAAAACCGTATGTCTAATGTATTCTCAAAAGCATTTCAAGAATTGTGTGGACATTTAAATGATGTGATTGATGAAGAGGAGATTGGTGACCTTCCACCTGGATTCGAAAAGAACTCTCAGACAATTGTCCCACACTACAAATCAAAATTTCGACCTTCAAGAATAGTTGAATGTAATCCTAAGATTACAGAATATGTTGCATCTGCACTGTGCAGACAGAAGCTGCATGATAAAGTTCTAGAAGAGTGGAAGTTGTCGTTTCTAGATTCTGCATTTAATCAAGTTTTTATGTCTTCGTGTACCATAAAGAAACATTTTCAGTGTCGTGGTCACGAGAAGGGGAAATCAGTCAGTGTAAGCAAGAAACAATTGGACGATGCTACTTCTGGACTGGGAAAAGTGAAGGAAGGTGCAAAAAGTTCTGGAGCTCCTCCGGTGAGTGGAAAGTATGCATATTATCGCAAGAAGCTGTCACGGAAAGAGTTTGGCTCCTCTCAGTCTGTCGTAGAAGACGATTCAGGGCCAGGGAAGCAGCCTCTGGCTAAGTTAAGGAAAATTGTTTCTGGAGATGTGCATGAGACTGCAGAAGTCAAAATAGCTGCTATTAAACGTGGAAAGGCTAAGATGTTTAAAGGGAAGAAGGATACATCTTCTAAAAGCAGGTCTTCTGTCATTGTCAATAATAGCTCACCCAGTTATCAGTTATCCCTGACGAATAAAACTAGCCAGAAAGTATTGAAGTTGGCGTATGATGTTACAGATGTTGTGAAGTCTAATGAAAAGAAGCTTTCAGCGTCAACAGATAATAGAGTTAGCATGAAGGTAGTTAAAAGCAATAATTCTGATGGCACCGTTCATAGAAAAACCACTGGTCATATCGCCAGAGAGAAACTAAATGCAACAAATAAAGCATCAAAGTCAAAAAAGAAGCATCAAACAGATGGTGTGACATCATCACATCCTGCTAAGGTTTTGAAAATTTCAAATAAGGGTGCAAGTCTGGGAGCTAGCAAAAAAGTAACTGTGGCACGGAGAGATTCTGCTGAATCCAAGTCATTGGATTTATGTCCTCAATCTAATGGATGTGCTAGGACTTCTATTAATGGGTGGGAATGGCATAAATGGTCTCAAAGTGCAAGTCCTGCATGTAGAGCACGTGTCAGGGGTCTTCTGCGTGTACAAAACAAGAGCATAGGTTCTGAAAATAATTCATCTCAGTTGTCAAATGGTAAGGGTCTTTCTGCAAGAACAAATAGGGTGAAATTGCGCAACCTTGTTGCTGCAGCTGAGGGTGCAGATCTTCTGAAAGTGCCTCAATTGAAGGCACGGAAAAAGCAATTACGTTTTCAAAGGAGCAAGATACATGACTGGGGTCTTGTTGCCTTGGAGCCAATAGAAGCAGAGGACTTTGTGATTGAATATATTGGAGAATTAATTCGTTCTCGGATATCCGATATACGTGAGCGTCAATATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTTAGACTTGATGATGGTTACGTGGTTGATGCTACCAAGAGAGGTGGGATTGCAAGATTTATTAATCATTCGTGTGAGCCCAACTGTTACACAAAGGTTATATCTGTTGAGGGTCAAAAGAAGATTTTTATATATGCAAAACGGCATATAAAAGCTGGTGAAGAGATTACATACAATTATAAGTTTCCCTTGGAGGAGAAAAAGATTCCCTGCAACTGTGGTTCCAAAAAGTGTCGCGGATCAATGAATTAG 3483 0.3931 MDISRYVSYVFHNMQKLLRHDHRSIRSTGDFLLCGNIDDKVDPNSEMDRNSDVPVCSTSTVNISHSHQSFCGFVQQPAFVSGWMYVNEQGQMCGPYIKEQLYEGLTTGFLPFELPVYPVINGTIMNPVPLNYFKQFPDHVSTGFAFLSMDFSGTRMPTNCSSSSLLAVNPDSMIISCQMVGGECCWLYEDKKGIKHGPHSISELISWYHHGYLEDSTVISHFDNKYGTFMLLSAVNALKEDISGTICGSDSKSNGVGNVVNLVCEISENISSQLHMGIMKAARRVVLDGIIGDIIAEFVTEKKYNRHKLESADQTSETCMLDSKMMNKRTSISSEPAPSHILDGQACHEISRPSLTSVKSVGSIENFWWSYAAVRKVLFEHCLQVMWNAIFSDTVTEYVFSWRKRKRWSHPTPQSSVNESKDYVDMIKSEALVLRPGSSVCNVDGDIQSGVMKTERDCHTELFSSPNNLKSRNLPEGQTVSCSDHNSKDLTCIIGIVENELHISSKESLADYVQSVVDKEVNKLIPSLEKDRSSEVDVSDCHLSEMLTGKTSVNKVLNDKSIDPVKSGDSICVPSSENRMSNVFSKAFQELCGHLNDVIDEEEIGDLPPGFEKNSQTIVPHYKSKFRPSRIVECNPKITEYVASALCRQKLHDKVLEEWKLSFLDSAFNQVFMSSCTIKKHFQCRGHEKGKSVSVSKKQLDDATSGLGKVKEGAKSSGAPPVSGKYAYYRKKLSRKEFGSSQSVVEDDSGPGKQPLAKLRKIVSGDVHETAEVKIAAIKRGKAKMFKGKKDTSSKSRSSVIVNNSSPSYQLSLTNKTSQKVLKLAYDVTDVVKSNEKKLSASTDNRVSMKVVKSNNSDGTVHRKTTGHIAREKLNATNKASKSKKKHQTDGVTSSHPAKVLKISNKGASLGASKKVTVARRDSAESKSLDLCPQSNGCARTSINGWEWHKWSQSASPACRARVRGLLRVQNKSIGSENNSSQLSNGKGLSARTNRVKLRNLVAAAEGADLLKVPQLKARKKQLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRSRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIKAGEEITYNYKFPLEEKKIPCNCGSKKCRGSMN 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01096 1160 SMART PostSET_3 1144 1160 IPR003616 -
Car01g01096 1160 CDD SET_SETD1 1009 1156 - -
Car01g01096 1160 Pfam SET domain 1033 1137 IPR001214 GO:0005515
Car01g01096 1160 SUPERFAMILY SET domain 1017 1157 IPR046341 -
Car01g01096 1160 Gene3D - 174 253 IPR035445 -
Car01g01096 1160 Gene3D - 73 148 IPR035445 -
Car01g01096 1160 ProSiteProfiles SET domain profile. 1021 1138 IPR001214 GO:0005515
Car01g01096 1160 MobiDBLite consensus disorder prediction 875 896 - -
Car01g01096 1160 SUPERFAMILY GYF domain 180 235 IPR035445 -
Car01g01096 1160 Gene3D SET domain 863 1160 IPR046341 -
Car01g01096 1160 ProSiteProfiles GYF domain profile. 183 233 IPR003169 GO:0005515
Car01g01096 1160 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 44 1160 IPR044570 GO:0042800|GO:0051568
Car01g01096 1160 MobiDBLite consensus disorder prediction 875 892 - -
Car01g01096 1160 ProSiteProfiles Post-SET domain profile. 1144 1160 IPR003616 -
Car01g01096 1160 SMART gyf_5 184 238 IPR003169 GO:0005515
Car01g01096 1160 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 44 1160 - -
Car01g01096 1160 SMART set_7 1021 1144 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01096 Car-Chr1 10851638 10864530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01096 1020 1160 C2H2 Transcription Factor Family AT2G23740 36.196 2.49e-18 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car01g01096 SET 5.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01096 - - cam:101514300 1618.21