Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01095 ATGGTGAAATTTCTGAAGCCAAACAAAGCCGTAATCGTCCTTCAAGGACGATACGCCGGTATCAAGAAATATCCAAGCAAGGTTATCAAGAAGGATTCAGCAAAGAAAACCGCTAAGAAATCGCGCGTTAAGGCTTTCGTTAAACTTGTGAACTATCAACATTTGATGCCTACTCGTTACACTCTTGATGTTGATCTTAAAGAGGTTGTTACTCCTGATTCTCTTCAGTCTAAGGATAAGAAGGTTACTGCTTTGAAGGAGGCTAAGAAGAGGTTCGAGGATCGTTTCAAAACTGGGAAGAATAGGTGGTTCTTCACTAAGCTCAGGAGTCAAACAGTTGGACTTTGTGTGATTTGGAGTACAACTATGAAGTTTGGATATATTTTCGAGTCTCACAGTTGGATTTGA 408 0.402 MVKFLKPNKAVIVLQGRYAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRSQTVGLCVIWSTTMKFGYIFESHSWI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01095 135 Coils Coil 75 95 - -
Car01g01095 135 PANTHER 60S RIBOSOMAL PROTEIN L27 1 22 IPR001141 GO:0003735|GO:0005840|GO:0006412
Car01g01095 135 PANTHER 60S RIBOSOMAL PROTEIN L27 19 109 - -
Car01g01095 135 SUPERFAMILY Translation proteins SH3-like domain 2 109 IPR008991 -
Car01g01095 135 PANTHER 60S RIBOSOMAL PROTEIN L27 1 22 - -
Car01g01095 135 PANTHER 60S RIBOSOMAL PROTEIN L27 19 109 IPR001141 GO:0003735|GO:0005840|GO:0006412
Car01g01095 135 Gene3D - 19 110 IPR038655 -
Car01g01095 135 CDD KOW_RPL27 6 63 IPR041991 -
Car01g01095 135 Pfam Ribosomal L27e protein family 27 109 IPR001141 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01095 Car-Chr1 10835968 10837079 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01095 1 109 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 70.896 9.79e-60 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01095 K02901 - mnt:21400722 182.185