Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01089 ATGGCTGAAATTAACTCTCACACTCCAACAATTAGCCCAACAATAAGCAAACCATGTAACAATAATCCTCCACAACATGGTCTCAATTTAATGGTTCTATTAGCAGCTATAATATGTGCTTTATTATGTGCTCTTGGTCTCAACACAATGTTACAATGTGTGTTCCAATGTGCTAACCGTGTCCTTACTCAACCTCTACATTGGATTGCTTCTAGAAGGATCAATTCAGGACTAAAGAAGAAAGAAATGGTTGCTTTGCCAACATCAATTTATACTAATTCACCTCATGAATCCCCTCTTTCTACTACATCTTTGGATTCTAATTGTGCCATTTGCTTAGAGAAGTTTTGTGATGGTGATAAGATGAAGTTGCTACCAAAGTGTAATCATCATTTTCATGTTGTTTGTATTGATAAGTGGTTGCTTTCTCATTCTTCTTGTCCTACTTGTAGGAACATCATCAACTCCAATGATTCCTGTTTTTGCATTTTAATATCATAG 501 0.3553 MAEINSHTPTISPTISKPCNNNPPQHGLNLMVLLAAIICALLCALGLNTMLQCVFQCANRVLTQPLHWIASRRINSGLKKKEMVALPTSIYTNSPHESPLSTTSLDSNCAICLEKFCDGDKMKLLPKCNHHFHVVCIDKWLLSHSSCPTCRNIINSNDSCFCILIS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01089 166 Pfam Ring finger domain 108 151 IPR001841 -
Car01g01089 166 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 15 156 - -
Car01g01089 166 PANTHER OS06G0666500 PROTEIN 15 156 - -
Car01g01089 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 156 IPR013083 -
Car01g01089 166 SUPERFAMILY RING/U-box 108 156 - -
Car01g01089 166 SMART ring_2 109 150 IPR001841 -
Car01g01089 166 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01089 Car-Chr1 10783517 10784017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01089 11 152 C3H Transcription Factor Family AT3G10910 39.241 3.51e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01089 - - gmx:100803003 224.942