Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01066 ATGAAAAAATTGAAACTTTTTCACTTGTGCTTCTTCTCTTGTGTTCTATTAGTCCTTTGCAATGGTTTAAACAATGGAATAACTCAAATAAGTACTTTGAAAGTGCTTTTGGAGGTGAAATCATCTTTTTTGAAAGACCCTGAAAATGTTTTGATTGATTGGTCAGAGAACAACACTGATTACTGTAGTTGGAGAGGTGTTTCATGTGAATTGATCAAAAAGTTGAATTCAAATGACTCGGTGCATGCTGTAGTTGGACTCAACCTATCCAACTCGTCACTCACTGGGTCAATATCACCTTCACTCGGTCATTTACAAAACCTACTCTACCTTGATCTTTCATCAAACAATCTTGTGGGTCCCATTCCACCTTCTCTTTCCAACCTCACCAAATTAGAATCTTTGCTTCTCTTTTCAAACCAACTAAAGGGTCAAATTCCCACCGAGTTAGGCTCGTTAACGAGTCTCCGAGTTTTGCGACTCGGTGACAATGAACTCAGTGGTTCAATTCCCGCTTCGTTCGGCAATTTGGTCAACCTTGTTATCCTTGGTTTAGCTTCATGCAGACTCACGGGGTTAATTCCGAGTCAACTCGGTCGACTCAGTGAGTTGGAGAACATGATTCTTCAAGACAACGAGTTAACAGGTCCGATTCCGTCCGAGTTAGGTAACTGTTCAAGCCTCATCAAATTCTCTGCAGCTGAAAACAAACTCAATGGAACAATCCCGAGTCAACTGAGTCAACTCAGAAACCTCCAAGTTCTCAACTTTGCAAACAACAGCTTAATAGGGGAGATACCGGGTCAATTCGGTCAAATGAGTGAGCTTCTTTATCTCAATTTAATGGGAAACAAACTCGAGGGTCACATTCCAATGTCTCTATCTCAAATGGGCAAGCTTCAAAATCTCGACTTGTCAATGAACAAACTCAGTGGAGGGATTCCAGAAAATTTCAGCATCATGGGTCAGTTGAAATACATGGTTCTTTCTGGTAACCCATTATATGGAAAAATTCCAAAAACTTTATGTTCCAATGCTACAAATTTGGAGCAATTAATTATATCAATGTGTGGACTTTGTGGTGAGATTCCAATTGAGTTGAGTGAATGTAAATCATTGAAGCAACTTGATTTATCAAACAATTCATTCAATGGTTCAATACCTATTGAGATTTATAGTTTATTGGGTTTAACTGAACTTTTGCTTCACAACAATAGTTTGGTTGGTTCAATTTCACCTTTCATAGGTAACTTAACAAACATGCAAACACTTGCATTGTATCATAACAAGTTGCAGGGTACTCTGCCTAAAGAGATTGGAAGGCTTGGAAAATTGGAAACTTTTTATCTTTATGATAATCAATTTTCTGGAAAAATTCCTATGGAGATTGGTAATTGTTCAAATTTGCAAAAGGTTGATTTATTTGGTAACCATTTTAGTGGAAGAATTCCAATTACTATTGGAAGGCTTAAAGAGTTGAATTTTCTTCACCTTAGACAGAATGAGCTTGTTGGTGAGATTCCAGCTACACTTGGTAATTGTCATAAATTGAATGTGCTTGATTTGGCAGATAATAATCTCTCTGGTGGAATTCCTGCAACATTTGGTTTCCTTAAAGACTTGCAGCAGTTCATGCTTTACAACAATTCTCTTGAAGGTAGTCTTCCTCACCAAATGGTAAATATAGCAAATTTGACTAGAGTTAATCTTTCAAAGAATAGACTTAATGGAAGTTTGGTTCCATTGTGTAGCTCTAGGTTGTTTCTTTCTTTTGATGTCACAGGTAATGAATTTGATGGTAAAATTCCTTCACGGTTGGGAAATTCAGTGTCCCTTGAGAGGCTTAGATTAGGAGGTAACAAATTTTCTGGTGAAATTCCAAGGACATTGGGAAAAATTGTCGGATTGTCGTTGTTAGACTTATCAGGAAATTCACTCATAGGACCAATACCAAGTGAACTATCTTTGTGTAGTAAACTAGCCTTCATTCATTTAAACAATAACCTTCTTTTTGGACACATTCCATCATGGTTAGGAAATTTGCCTAAGTTAGGAGATCTTAATCTTGCATTTAATCAATTTTTTGGTCCTATTCCATTAGGCCTATTCAAATTACCTATGTTGTTGGTTCTTTCATTGAACAACAATTCCCTTAATGGAAGTCTCTCAAATGATATTGGTGATCTTCAATCCCTTAATGTTCTTAGACTTGACCATAATAATTTTTCTGGACCAATTCCTATTGCCATAGGTAAGTTGAGAAATCTTTATGAGCTTACTCTCTCTCGAAATGTGTTTAGTGGAAACATACCAATTGAGATTGGAAATCTTCAAAATCTTCAAATCGTTTTAGACCTCAGTTACAATAATCTCTCTGGTCAGCTTCCATCTTCTCTTGGCACGTTGGCGAAATTGGAATCACTCGATCTATCTCACAATCAACTTAATGGAGAAGTTCCTTCACTCATCGCCGAAATGCTTAGTTTGGAAAAGCTTGATATTTCTTACAATAATTTTCAAGGTGCATTGGATAAGCGGTTCTCCCGCTGGCCAAACGAAACGTTTGAAGGGAATATCCGTCTCTGTGGAGCCTCTCTTGGGAGATGCAGCCGCAGCCGTGCTTTCCGCAATAAGCTTTCAGGGTTAAATGAGACATCGATCATTATAATCTCAGCCATTTCAACTCTAGCTGCAATTGCACTAATGGTTCTTGCTGTAAAAATCTTCTTGAGAAATAGGCAAGATTTTTCAAAGAAAGGCAATGAAGTTGGCTGGTTTTTCTCCTCGTCTTCGTCGCAAGCACAGAAACGGCTCTTGTTCCCTCTAAGTACTACAGCTGGAAATCGCGATTTCAGGTGGGAAGACATCATGGAAGCTACAAACAATTTGAGTGATGAGTTCATAATTGGTGCTGGAGGTTCCGGAACAGTCTACCGGGTCGAATTTGCTACCGGTGAAACTTTTGCTGTCAAGAAAATTTCATTGAAAGATGAATATCTTTTCCATAAAAGCTTTATAAGAGAAGTGAAGACTTTAGGGAGGATTAAGCATAGACATTTGGTGAAACTGGTTGGTTGTTGTAGCAATAGAAACAAAGGAACAGGTTGGAATTTTTTGATATATGAGTTTATGGAGAATGGAAGTGTGTGGGATTGGTTACATAAAAAACCTCTTAAAGCAAAGAGAAGTCTTGATTGGGAAACAAGGTTCAAAATTGCTTTGGGTTTAGCTCAAGGAGTGGAGTACCTTCATCATGATTGTGTGCCAAAGATCATTCATAGGGACATCAAATCAAGCAATGTGTTGTTGGATTCTAAAATGGATGCACACTTAGGAGATTTTGGATTGGCTAAAGCACTCATTGAGAATCATGACTCTAATACTGAGTCTACTTCTTGTTTTGCAGGATCTTATGGTTACATAGCCCCAGAGTTTGGATACTCATTGAAGGCAACAGAAAAGAGTGACATTTACAGCATGGGAATTGTGCTAATGGAACTTATTACTGGTAAAATGCCAACTGATGCAGCATTTAGAGGAGGCATAGACATGGTGAAATGGGTGGAGATGCACATTAACATGAAAGAAACTGAACGTGAAGAAGTGATAGATCCTGAACTCAAACCCCTTTTACCTTTTGAAGAGTTTGCTGCATTTCAAGTGCTTGAGATAGCATTACAGTGTACCAAAACTACACCACTTGAGAGGCCATCATCAAGGCAAGTATGTGATCTTCTTCTACATGTTTCCAAGAACAAAAAGCTGGATTTTGAGAAGATGAAATTGAATCATTAG 3795 0.3794 MKKLKLFHLCFFSCVLLVLCNGLNNGITQISTLKVLLEVKSSFLKDPENVLIDWSENNTDYCSWRGVSCELIKKLNSNDSVHAVVGLNLSNSSLTGSISPSLGHLQNLLYLDLSSNNLVGPIPPSLSNLTKLESLLLFSNQLKGQIPTELGSLTSLRVLRLGDNELSGSIPASFGNLVNLVILGLASCRLTGLIPSQLGRLSELENMILQDNELTGPIPSELGNCSSLIKFSAAENKLNGTIPSQLSQLRNLQVLNFANNSLIGEIPGQFGQMSELLYLNLMGNKLEGHIPMSLSQMGKLQNLDLSMNKLSGGIPENFSIMGQLKYMVLSGNPLYGKIPKTLCSNATNLEQLIISMCGLCGEIPIELSECKSLKQLDLSNNSFNGSIPIEIYSLLGLTELLLHNNSLVGSISPFIGNLTNMQTLALYHNKLQGTLPKEIGRLGKLETFYLYDNQFSGKIPMEIGNCSNLQKVDLFGNHFSGRIPITIGRLKELNFLHLRQNELVGEIPATLGNCHKLNVLDLADNNLSGGIPATFGFLKDLQQFMLYNNSLEGSLPHQMVNIANLTRVNLSKNRLNGSLVPLCSSRLFLSFDVTGNEFDGKIPSRLGNSVSLERLRLGGNKFSGEIPRTLGKIVGLSLLDLSGNSLIGPIPSELSLCSKLAFIHLNNNLLFGHIPSWLGNLPKLGDLNLAFNQFFGPIPLGLFKLPMLLVLSLNNNSLNGSLSNDIGDLQSLNVLRLDHNNFSGPIPIAIGKLRNLYELTLSRNVFSGNIPIEIGNLQNLQIVLDLSYNNLSGQLPSSLGTLAKLESLDLSHNQLNGEVPSLIAEMLSLEKLDISYNNFQGALDKRFSRWPNETFEGNIRLCGASLGRCSRSRAFRNKLSGLNETSIIIISAISTLAAIALMVLAVKIFLRNRQDFSKKGNEVGWFFSSSSSQAQKRLLFPLSTTAGNRDFRWEDIMEATNNLSDEFIIGAGGSGTVYRVEFATGETFAVKKISLKDEYLFHKSFIREVKTLGRIKHRHLVKLVGCCSNRNKGTGWNFLIYEFMENGSVWDWLHKKPLKAKRSLDWETRFKIALGLAQGVEYLHHDCVPKIIHRDIKSSNVLLDSKMDAHLGDFGLAKALIENHDSNTESTSCFAGSYGYIAPEFGYSLKATEKSDIYSMGIVLMELITGKMPTDAAFRGGIDMVKWVEMHINMKETEREEVIDPELKPLLPFEEFAAFQVLEIALQCTKTTPLERPSSRQVCDLLLHVSKNKKLDFEKMKLNH 1264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01066 1264 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 11 1261 - -
Car01g01066 1264 Gene3D Ribonuclease Inhibitor 389 485 IPR032675 -
Car01g01066 1264 SMART serkin_6 963 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01066 1264 PRINTS Leucine-rich repeat signature 373 386 - -
Car01g01066 1264 PRINTS Leucine-rich repeat signature 802 815 - -
Car01g01066 1264 ProSiteProfiles Protein kinase domain profile. 963 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01066 1264 SUPERFAMILY L domain-like 32 339 - -
Car01g01066 1264 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1091 1103 IPR008271 GO:0004672|GO:0006468
Car01g01066 1264 ProSitePatterns Protein kinases ATP-binding region signature. 969 992 IPR017441 GO:0005524
Car01g01066 1264 SMART LRR_typ_2 826 857 IPR003591 -
Car01g01066 1264 SMART LRR_typ_2 705 729 IPR003591 -
Car01g01066 1264 SMART LRR_typ_2 321 345 IPR003591 -
Car01g01066 1264 SMART LRR_typ_2 802 825 IPR003591 -
Car01g01066 1264 SMART LRR_typ_2 249 273 IPR003591 -
Car01g01066 1264 SMART LRR_typ_2 418 442 IPR003591 -
Car01g01066 1264 SMART LRR_typ_2 753 777 IPR003591 -
Car01g01066 1264 SMART LRR_typ_2 201 225 IPR003591 -
Car01g01066 1264 SMART LRR_typ_2 490 514 IPR003591 -
Car01g01066 1264 SMART LRR_typ_2 297 320 IPR003591 -
Car01g01066 1264 SMART LRR_typ_2 105 129 IPR003591 -
Car01g01066 1264 SMART LRR_typ_2 153 176 IPR003591 -
Car01g01066 1264 Gene3D Phosphorylase Kinase; domain 1 927 1043 - -
Car01g01066 1264 Gene3D Ribonuclease Inhibitor 32 188 IPR032675 -
Car01g01066 1264 Gene3D Ribonuclease Inhibitor 289 388 IPR032675 -
Car01g01066 1264 Gene3D Ribonuclease Inhibitor 486 582 IPR032675 -
Car01g01066 1264 Gene3D Ribonuclease Inhibitor 189 288 IPR032675 -
Car01g01066 1264 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 11 1261 - -
Car01g01066 1264 SUPERFAMILY Protein kinase-like (PK-like) 942 1246 IPR011009 -
Car01g01066 1264 SUPERFAMILY L domain-like 590 852 - -
Car01g01066 1264 SUPERFAMILY L domain-like 290 596 - -
Car01g01066 1264 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Car01g01066 1264 Pfam Leucine rich repeat 516 575 IPR001611 GO:0005515
Car01g01066 1264 Pfam Leucine rich repeat 754 815 IPR001611 GO:0005515
Car01g01066 1264 Gene3D Transferase(Phosphotransferase) domain 1 1044 1263 - -
Car01g01066 1264 Pfam Leucine Rich Repeat 155 177 IPR001611 GO:0005515
Car01g01066 1264 Pfam Leucine Rich Repeat 107 129 IPR001611 GO:0005515
Car01g01066 1264 Gene3D Ribonuclease Inhibitor 583 877 IPR032675 -
Car01g01066 1264 ProSiteProfiles Leucine-rich repeat profile. 804 826 IPR001611 GO:0005515
Car01g01066 1264 Pfam Protein kinase domain 968 1243 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01066 Car-Chr1 10336873 10341758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01066 745 855 Receptor kinase-like Gene Family AT1G17750 38.739 3.20e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car01g01066 Pkinase 3.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01066 - - gmx:100785174 1774.99