Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01041 ATGTTTAACTTCAATTCATGGCGCCATAAACCACTTCTCTACTTCAAGACTGTAACTTTCTCACCAATATCCCAAAACCCATTACCACTTTCTCTCTATTTCTGCACCAACACTTCTCATTCAACCTCTTTTGCAGTCTCCTACCTCATCCACAATTTTGGGTTTTCACCACAATCTGCAAACAAACTCTGCTCCACTCACAGAGTTAAGTTTAAGACCAACCAAAAACCTGATTCAGTTCTTAACTTTTTTAAAAACCATGGTTTCTCAAACACCCAATTACACAACATGATTACTAAGGCACCATGGCTTCTTTCCTGCGACCCCATCAAAAGGGTTTTGCCAAAGTTTCAATTTTTTCTCTCCAATGGTGCCTCTAACTCTGACATTGTTGATTTTGTTAGTAAGAACCCTGTGGTCCTTTATGCAAGCATGAATCAAATGGTCCCAACCTATGAATTGGTTTATAGGTTTTTGAAATCTCACAAGGACACTATTGCTTGTGTAAATCAATGTTCATCTTTCTTTGGAGATCGTGTTGTGCCACATAACATCACATTGTTGATTGAGAATGGAGTGACCGACTCTAACATTGCAAGAATGCTTCAGAGACGAAGTAAGATATTCAACAGACGCGGCATACTGAAGGTTGTGGGGGAGTTAAAGGATTTGGGGTTTAATCCTTCAAAATCAGGATTCTCAATAGCACTGCTTGCCAAAATCACTGTAAACAAAACCTTATGGAAAGAGAAAGTTGATGCCTTTAAGAAATGGGGTTGGTCTGATCAAGATGTTCTGGAAGCATTTAGAAGGCAGCCTCATTGTATGTTAACATCCATTGATAAAATTAATTTAGTGATGACCTTTTGGGTCAATCAGTTGGGTTGGGATGCTATGGCCCTTGTCAAAGGATCCGCAATTCTTTTGTTAAGTTTGGAAAAAAGGATCATTCCAAGGGCCCAAGTAGTGCAATATCTGCTAAAGAAAGGTTTGCGAAAAACGAATGCAAGCTTAATTTGTCCCTTTATAGTGTCTGAGAAGATGTTTCTTGAGATGTTTATAAAACGTTTTGAGGAGTCTTCTTATCTATTAAAGCTGTATGGGAAAAACTCAATCTTGCTTAGACCAGGGACAAAACTTGCTTGTCATGATTAG 1155 0.3853 MFNFNSWRHKPLLYFKTVTFSPISQNPLPLSLYFCTNTSHSTSFAVSYLIHNFGFSPQSANKLCSTHRVKFKTNQKPDSVLNFFKNHGFSNTQLHNMITKAPWLLSCDPIKRVLPKFQFFLSNGASNSDIVDFVSKNPVVLYASMNQMVPTYELVYRFLKSHKDTIACVNQCSSFFGDRVVPHNITLLIENGVTDSNIARMLQRRSKIFNRRGILKVVGELKDLGFNPSKSGFSIALLAKITVNKTLWKEKVDAFKKWGWSDQDVLEAFRRQPHCMLTSIDKINLVMTFWVNQLGWDAMALVKGSAILLLSLEKRIIPRAQVVQYLLKKGLRKTNASLICPFIVSEKMFLEMFIKRFEESSYLLKLYGKNSILLRPGTKLACHD 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01041 384 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 22 373 - -
Car01g01041 384 Gene3D Transcription termination factor 3, mitochondrial 155 361 IPR038538 -
Car01g01041 384 Pfam mTERF 81 227 IPR003690 GO:0003690|GO:0006355
Car01g01041 384 Pfam mTERF 243 349 IPR003690 GO:0003690|GO:0006355
Car01g01041 384 SMART mt_12 199 227 IPR003690 GO:0003690|GO:0006355
Car01g01041 384 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Car01g01041 384 SMART mt_12 131 165 IPR003690 GO:0003690|GO:0006355
Car01g01041 384 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Car01g01041 384 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Car01g01041 384 PANTHER CGI-12 PROTEIN-RELATED 22 373 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01041 Car-Chr1 9972148 9973302 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car01g01041 mTERF 6.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01041 K15032 - gmx:102663414 401.364