Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01037 ATGATTACTAAGGCACCATGGCTTCTTTCCTGCGACCCCATCAAAAGGGTTTTGCCAAAGTTTCAATTTTTTCTCTCCAATGGTACCTCTAACTCTAATATTGTTGATTTTGTTAGTGAGAACCCTGTGGTCCTTTATGCAAGCATTAATCAAATGGTCCCAACCTATGAATTGGTTTATAGGTTTTTGAAATCTCACAAGGACACTATTGCTTGTGTAAATCAAAATTCATCTTTCTTTGGAGATCGTGTTGTGCCACATAACATCACATTGTTGATTGAGAATGGAGTGACCGACTCTAACATTGCAAGAATGCTTCAGAGACGAAGTAGGGTATTCAACATACGCGGCATACTGAAGGTTGTGGGGGAGTTAAAGGATTTGGGGTTTAATCCTTCAAAATCAGCATTCTCAATAGCACTGATTGCCAAAATCACTGTAAACAAAACCTTATGGAAAGAGAAAGCTGATACCTTTAAGAAATGGGGTTGGTCTGATCAAGATGTTCTGGAAGCATTTAGAAGGCAGCCTCATTGTATTAACATCCATTGA 552 0.3877 MITKAPWLLSCDPIKRVLPKFQFFLSNGTSNSNIVDFVSENPVVLYASINQMVPTYELVYRFLKSHKDTIACVNQNSSFFGDRVVPHNITLLIENGVTDSNIARMLQRRSRVFNIRGILKVVGELKDLGFNPSKSAFSIALIAKITVNKTLWKEKADTFKKWGWSDQDVLEAFRRQPHCINIH 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01037 183 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 1 180 - -
Car01g01037 183 Pfam mTERF 2 181 IPR003690 GO:0003690|GO:0006355
Car01g01037 183 PANTHER CGI-12 PROTEIN-RELATED 1 180 IPR003690 GO:0003690|GO:0006355
Car01g01037 183 Gene3D Transcription termination factor 3, mitochondrial 58 183 IPR038538 -
Car01g01037 183 SMART mt_12 1 30 IPR003690 GO:0003690|GO:0006355
Car01g01037 183 SMART mt_12 103 131 IPR003690 GO:0003690|GO:0006355
Car01g01037 183 SMART mt_12 35 69 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01037 Car-Chr1 9947878 9948429 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car01g01037 mTERF 2.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01037 K15032 - gmx:102663414 207.994