Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01035 ATGTTCAAGTTCAAAATATGGCACAATAGAACCATTCTCTATCTTAAGGGTTTAACTTCCGCACCAACATCACCTCTCTTTTCTCTGCATTTCTGCACCAACACTTCCGATTCACCATCATTTGCAGTTTCATACCTCATCCACAATTTTGGATTCTCCCCACAATTTGCAAACAAACTTTGCTCCACTTACAGTGTTAAATTTAAGACCGCTCAAAAACCTGACTCTGTTCTCAGCTTCTTTAGAAATCAAGGCTTCTCTGATTCCCAAATACACAATATCATTGCAAAGGTACCAAGTCTTCTTTCCTGCGACCCCATCAAAAGGGTATTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTAACTCTGACATTGTTAACCTTGTTAGTAAGAACCCCGTGGTCCTGTCTTATAGCTTGAAGAATCGACTAGTCCCAAACTATGAATTGGCTTATAGATTCTTGAAATCTCCCAAGGAAACTATTTCGTGTACAATTTCCAATTCAGCTTTCTTTGGAAAAAGTAACGTGCCACATAACATCAGATTGCTGATGGAGAATGGAGTAAAAGACTTGAACATTACAAGATTGCTTCAGACTCGGTGTCGGGCATTCCAGCCACATGACTTGCTGAAGTTGGTGGAGGAATTAAAGGAGTTGGGTTTCAATCCTTCAAAATCAACTTTTGGTGTAGCATTGCATGCCAAAACAACTGTAACCAAAACCCGGTGGAAAGAGAAAGTTGATGCCTTTAAGAAATGGGGTTGGTCTGATCAAGATATTGTGGAAGCATTTAGAACGCAACCTAATTGTATGTTAGTATCTGTTGAAAAAATTAATTTATTTATGAGTTTTTGGGTCAATCAGTTGGGTTGGGATGCTATGGCCCTTGTCAAAGGATCCTCGGTTTTTACATTAAGTTTGGAAAAAAGGATCATTCCAAGGGCCCAAGTAGTGCAATATCTGCTGAAGAAAGGTTTGCGAAAAAAGACTGCAAGCGTGATTTTTCCATTTGTAGTGCCTGAGAAGAGGTTTCTTGATATGTTTGTAAAACGTTTTGAGGAGTCCTCTTATCTATTAAAGTTGTATGGGAAAAACTCAAACTTGCATGCACCAGGGACAAAACCTGCTTGTCATGATTAG 1149 0.3908 MFKFKIWHNRTILYLKGLTSAPTSPLFSLHFCTNTSDSPSFAVSYLIHNFGFSPQFANKLCSTYSVKFKTAQKPDSVLSFFRNQGFSDSQIHNIIAKVPSLLSCDPIKRVLPKFQFFLSKGASNSDIVNLVSKNPVVLSYSLKNRLVPNYELAYRFLKSPKETISCTISNSAFFGKSNVPHNIRLLMENGVKDLNITRLLQTRCRAFQPHDLLKLVEELKELGFNPSKSTFGVALHAKTTVTKTRWKEKVDAFKKWGWSDQDIVEAFRTQPNCMLVSVEKINLFMSFWVNQLGWDAMALVKGSSVFTLSLEKRIIPRAQVVQYLLKKGLRKKTASVIFPFVVPEKRFLDMFVKRFEESSYLLKLYGKNSNLHAPGTKPACHD 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01035 382 Pfam mTERF 78 225 IPR003690 GO:0003690|GO:0006355
Car01g01035 382 Pfam mTERF 244 347 IPR003690 GO:0003690|GO:0006355
Car01g01035 382 PANTHER CGI-12 PROTEIN-RELATED 26 371 IPR003690 GO:0003690|GO:0006355
Car01g01035 382 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 26 371 - -
Car01g01035 382 SMART mt_12 296 330 IPR003690 GO:0003690|GO:0006355
Car01g01035 382 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Car01g01035 382 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Car01g01035 382 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Car01g01035 382 Gene3D Transcription termination factor 3, mitochondrial 157 360 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01035 Car-Chr1 9909203 9916722 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car01g01035 mTERF 9.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01035 K15032 - gmx:102663414 396.741