Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01034 ATGTTCAAGTTCGATACTTTGTGTCACAAAACCCTTCTCTGCCTCAATCCCTTAACTTTCTCACCAGTATCCCAAAACCTATTACCATTTTCTCTCCATTTCTGTACCAACACTTCCAATTCATCATCATTTGCAGTTTCATACCTCATTCACAATTTTGGATTCTCCCCACTATTTGCAAACAAACTCTGCTCCACTTACAGTGTTAAGTTTAAGACTGCTCAAAACCCTGATTCTGTTCTCGCATTCTTTACAAACCATGGTTTCTCAAAAACCCAATTACACAACATGATTGCAAAGGCACCATGGCTTCTTTCCTGCGACCCTATCAAAAGGGTTTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTAACTCTGACATTGTTAACCTTCTCAGTAAGAACCCTACGGTCCTGTGTGCAAGTCTGGAGAATCAAATAGTCCCAACCTATGAATTGGCTGATAGATTCTTGCAATCTCACAAGGACACTTTTGCTTGTGTAAATCAGAGTTCATCTTTCTTTGCAGACAGTGCTGTGCCACATAACATCTCATTGTTGATTGAGAATGGAGTGACTGATTCTAACATTGCAGCATTGCTTCGAAGACAGAGTAGGTTATTCAACAGACGTGACTTTTTGAAGGTGGTAGGGGAATTAATGGATTTGGGGTTTAATCCTTCACAATCATATTTCTCAATAGCACTGGTTGCCAAAGCATCTGTAAAGAAAACCCTGTGGAAAGAGAAAGTTGATACCTTTAAGAAATGGGGCTGGTCTGATGAAGATGTTCTGGAAGCATTCAGAAAGCAACCTCATTGTATGTTGACCTCCATTGATAAAATTAATTTAGTGATGAGTTTTTGGGTCAATGACTTGGGTTGGGATGCCATGGCCATTGCCAAAAGACCAAGGGTTTTGGGGGCTAGTCTGGAGAGAAGGATCAAACCAAGAGCATCAGTTCTGCAATATCTTCTGAACAAAGGTTTGCTAAAAAAGAATGCAAGCTTAACTTCTCCATTTGTACACAGCGATAAGTTGTTTCACGACAGATATATAAAACATTATAAGGAGGAGTCATCTTATCTACTAAAGCTTTATAAAGAAAAATTGAATCTTGCACATGTCGGAGACAAAACTGACGTGTCATGA 1158 0.3929 MFKFDTLCHKTLLCLNPLTFSPVSQNLLPFSLHFCTNTSNSSSFAVSYLIHNFGFSPLFANKLCSTYSVKFKTAQNPDSVLAFFTNHGFSKTQLHNMIAKAPWLLSCDPIKRVLPKFQFFLSKGASNSDIVNLLSKNPTVLCASLENQIVPTYELADRFLQSHKDTFACVNQSSSFFADSAVPHNISLLIENGVTDSNIAALLRRQSRLFNRRDFLKVVGELMDLGFNPSQSYFSIALVAKASVKKTLWKEKVDTFKKWGWSDEDVLEAFRKQPHCMLTSIDKINLVMSFWVNDLGWDAMAIAKRPRVLGASLERRIKPRASVLQYLLNKGLLKKNASLTSPFVHSDKLFHDRYIKHYKEESSYLLKLYKEKLNLAHVGDKTDVS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01034 385 Pfam mTERF 81 228 IPR003690 GO:0003690|GO:0006355
Car01g01034 385 Pfam mTERF 246 350 IPR003690 GO:0003690|GO:0006355
Car01g01034 385 PANTHER CGI-12 PROTEIN-RELATED 22 377 IPR003690 GO:0003690|GO:0006355
Car01g01034 385 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 22 377 - -
Car01g01034 385 Gene3D Transcription termination factor 3, mitochondrial 158 368 IPR038538 -
Car01g01034 385 SMART mt_12 200 228 IPR003690 GO:0003690|GO:0006355
Car01g01034 385 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Car01g01034 385 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Car01g01034 385 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Car01g01034 385 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01034 Car-Chr1 9901979 9904611 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car01g01034 mTERF 5.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01034 K15032 - gmx:102663414 378.252