Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01032 ATGTTTACTATACTTCGTCATAATCCGATACCTTTTCTCTATCTCAAAACCCTAACTTTCCCATCAACCTCTAGACATTATTACCCTTTTCTCCATCACTACCCATCACCGTTTTCTCTTCATTTCTGCACCAACACTTCCGATTCACCATCATTTGCAGTCTCCTACCTCATCCACAATTTTGGCTTATCCCCACTCTTTGCAAACAAACTCTGCTCCACTTACCGTCTTACATTTAAGACTGCTCAAAAACCTGATTCAGTTCTCGCATTCTTTAGAAATCAAGGTTTCTCTGATTCCCAACTACACAACATGATTACAAGAACACCAGGGCTACTTTCCTGCAACCCCTCCAAAAGGGTTTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTAACTCTGACATTGTTGACTTTTTGAGTAAGAACCCCTTGGTTTTGTCGGCAAGCCTTGATAATCACATAGTCCCAACTTATGAATTGGTTTATAGATTCTTGCAATCTGACAAGGACGCTATTGCTTGTGCAATTCACCATCCAAAATTCTTTGGTTCAAGACTTGTGCCATGTAACATCAGATTGCTGATTGAGAATGGTGTGTCGGAAAAAACCATTGCAAGGATACTTCGGAACTGGTGTCGGTCATTATACACACATAATATGCTGAAGCTTGTGGAGGAATTAAAGGATTTGGGGTTTAATCCTTCACAATCAATTTTTGGTATAGCATTGCTTGCCAAAACATCTGTAAACAAAACCTTATGGAAAGAGAAAGTTGATGCCTTTAAGAAATGGGGTTGGTCTGATCAAGATGTTATGGAAGCATTTAGAAGGCAGCCTCATTGTATGTTAACATCCATTGATAAAATTAATTTAGTGATGAGTTTTTGGGTCAATGAGTTGGGTTGGGATGCTATGGTCATTGCCAAAGTACCAAGAATATTAGGGGCCAGTCTGGAGAGAACGATCATACCAAGAGTATCTGTTATACAATATCTTCAAAAGAAAGGACAAAGCAGGCATGTGATGAACAAATTTTCAGGTTCACACAATTTTCATAATCCAGATGAAGGCTTAGGCTTTATATTGATAAGTAATTCCACTGGATTCCTGAATAGGTTTCCCTTGGTTCTCTACACATCCTTATTTCTACGGAATATTTATAGTATGTTTGGTTTGGCGCCAGAGGCACCAATTGTGTGCTCTACCAAGCTTTCCCTGCAATTTCACAGAAGCTAG 1245 0.3912 MFTILRHNPIPFLYLKTLTFPSTSRHYYPFLHHYPSPFSLHFCTNTSDSPSFAVSYLIHNFGLSPLFANKLCSTYRLTFKTAQKPDSVLAFFRNQGFSDSQLHNMITRTPGLLSCNPSKRVLPKFQFFLSKGASNSDIVDFLSKNPLVLSASLDNHIVPTYELVYRFLQSDKDAIACAIHHPKFFGSRLVPCNIRLLIENGVSEKTIARILRNWCRSLYTHNMLKLVEELKDLGFNPSQSIFGIALLAKTSVNKTLWKEKVDAFKKWGWSDQDVMEAFRRQPHCMLTSIDKINLVMSFWVNELGWDAMVIAKVPRILGASLERTIIPRVSVIQYLQKKGQSRHVMNKFSGSHNFHNPDEGLGFILISNSTGFLNRFPLVLYTSLFLRNIYSMFGLAPEAPIVCSTKLSLQFHRS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01032 414 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 25 340 - -
Car01g01032 414 Gene3D Transcription termination factor 3, mitochondrial 67 191 IPR038538 -
Car01g01032 414 Gene3D Transcription termination factor 3, mitochondrial 192 377 IPR038538 -
Car01g01032 414 PANTHER CGI-12 PROTEIN-RELATED 25 340 IPR003690 GO:0003690|GO:0006355
Car01g01032 414 Pfam mTERF 89 236 IPR003690 GO:0003690|GO:0006355
Car01g01032 414 Pfam mTERF 254 340 IPR003690 GO:0003690|GO:0006355
Car01g01032 414 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Car01g01032 414 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Car01g01032 414 SMART mt_12 208 236 IPR003690 GO:0003690|GO:0006355
Car01g01032 414 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Car01g01032 414 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01032 Car-Chr1 9878579 9880835 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car01g01032 mTERF 2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01032 K15032 - gmx:102663414 394.815