Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01027 ATGCTTGTTTTTGTTTCATGTGTTTTCATCTTACTCATAGTGGTAAGAACTGGTGGATATAAAAAGGTGATTGCATCTCCTCGCCTTGTTGAAGTGGATCACCAAGGTTATCCTACATGGTTTTCTACTGATGACCGTATCTTGTTGTCTGAGCTCCAAAAAGGTCTAGCTCGACCCAGTACCATTGTGGCCAAGGATGATAGTGCCACCTTTGGTGAAGATTTCATTGCCATGTCAATTGCATTTGAGAATAAAGCTGGTCCAAAAGCTCAACAAGCAGTAGCACTTCGTGTTGAAGGTGATCGCTCAGTATTCTTTCGGTGTGGATTTCTTGGTTATCAATACACATTGTACGCAAACAAAGGTTATCAATTCTATCGTAACTGTGAGATTTATGGAACCATTGATTTTATCTTCGATAAGTCGGGTACTACCTTGATCCAGAACTCTAAGATCTTGGTAAGGAAGCCCATTCAAGGACAACAAAATGTTGTGGTGGCAGATGGATTATACAACAAGGAAAAGCACACGGGAATAGTTCTCCAAAACTGCTCCATCATGCCAGACATTGAGCTATATCCTTATCAGTTTATAGTGAAGACTTACTTGGCAAGGCCGTGGGAGGCTTTTTCAAGGGCGGTCTTCATTAACAATTATTTTGATGATTTTATTCAACGAGATGGATACATGATATGGAAACCTAATGAAACAAACACTGAAAACTCGTACTTCGCTGAGTTTGGAAACATTGGACCCAGTGCCAATGCTACATTTCAACTACAATACTTTGTattttaa 798 0.3972 MLVFVSCVFILLIVVRTGGYKKVIASPRLVEVDHQGYPTWFSTDDRILLSELQKGLARPSTIVAKDDSATFGEDFIAMSIAFENKAGPKAQQAVALRVEGDRSVFFRCGFLGYQYTLYANKGYQFYRNCEIYGTIDFIFDKSGTTLIQNSKILVRKPIQGQQNVVVADGLYNKEKHTGIVLQNCSIMPDIELYPYQFIVKTYLARPWEAFSRAVFINNYFDDFIQRDGYMIWKPNETNTENSYFAEFGNIGPSANATFQLQYFVF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01027 265 PANTHER PECTINESTERASE 69 260 - -
Car01g01027 265 Pfam Pectinesterase 68 257 IPR000070 GO:0030599|GO:0042545
Car01g01027 265 PANTHER PECTINESTERASE 69 260 - -
Car01g01027 265 SUPERFAMILY Pectin lyase-like 61 256 IPR011050 -
Car01g01027 265 Gene3D - 12 263 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01027 Car-Chr1 9800814 9802215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01027 73 257 Carbohydrate Esterase AT3G62170 50.538 1.71e-52 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01027 K01051 - gmx:100775225 244.973